Protein–RNA interactions for Protein: Q65CL1

Ctnna3, Catenin alpha-3, mousemouse

Predictions only

Length 895 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctnna3Q65CL1 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ctnna3Q65CL1 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ctnna3Q65CL1 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ctnna3Q65CL1 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ctnna3Q65CL1 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Ctnna3Q65CL1 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ctnna3Q65CL1 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Ctnna3Q65CL1 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ctnna3Q65CL1 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC19.66■□□□□ 0.74
Ctnna3Q65CL1 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ctnna3Q65CL1 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ctnna3Q65CL1 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ctnna3Q65CL1 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Ctnna3Q65CL1 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ctnna3Q65CL1 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC19.66■□□□□ 0.74
Ctnna3Q65CL1 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC19.66■□□□□ 0.74
Ctnna3Q65CL1 Mir5122-201ENSMUST00000175004 89 ntBASIC19.66■□□□□ 0.74
Ctnna3Q65CL1 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ctnna3Q65CL1 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ctnna3Q65CL1 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ctnna3Q65CL1 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ctnna3Q65CL1 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ctnna3Q65CL1 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ctnna3Q65CL1 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Ctnna3Q65CL1 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Ctnna3Q65CL1 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC19.66■□□□□ 0.74
Ctnna3Q65CL1 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ctnna3Q65CL1 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ctnna3Q65CL1 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Ctnna3Q65CL1 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ctnna3Q65CL1 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ctnna3Q65CL1 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ctnna3Q65CL1 Gm20472-201ENSMUST00000174403 1240 ntBASIC19.65■□□□□ 0.74
Ctnna3Q65CL1 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ctnna3Q65CL1 AC163280.1-201ENSMUST00000228194 1100 ntBASIC19.65■□□□□ 0.74
Ctnna3Q65CL1 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ctnna3Q65CL1 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ctnna3Q65CL1 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ctnna3Q65CL1 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ctnna3Q65CL1 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC19.64■□□□□ 0.74
Ctnna3Q65CL1 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Ctnna3Q65CL1 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ctnna3Q65CL1 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
Ctnna3Q65CL1 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ctnna3Q65CL1 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC19.64■□□□□ 0.73
Ctnna3Q65CL1 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ctnna3Q65CL1 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ctnna3Q65CL1 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC19.64■□□□□ 0.73
Ctnna3Q65CL1 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC19.64■□□□□ 0.73
Ctnna3Q65CL1 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Ctnna3Q65CL1 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Ctnna3Q65CL1 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Ctnna3Q65CL1 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ctnna3Q65CL1 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ctnna3Q65CL1 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ctnna3Q65CL1 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ctnna3Q65CL1 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ctnna3Q65CL1 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ctnna3Q65CL1 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ctnna3Q65CL1 Gm10461-201ENSMUST00000202073 4786 ntBASIC19.64■□□□□ 0.73
Ctnna3Q65CL1 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Ctnna3Q65CL1 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ctnna3Q65CL1 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC19.63■□□□□ 0.73
Ctnna3Q65CL1 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC19.63■□□□□ 0.73
Ctnna3Q65CL1 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Ctnna3Q65CL1 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ctnna3Q65CL1 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Ctnna3Q65CL1 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ctnna3Q65CL1 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ctnna3Q65CL1 Gm10231-201ENSMUST00000181584 441 ntBASIC19.63■□□□□ 0.73
Ctnna3Q65CL1 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ctnna3Q65CL1 Gm10175-202ENSMUST00000208752 441 ntBASIC19.63■□□□□ 0.73
Ctnna3Q65CL1 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ctnna3Q65CL1 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ctnna3Q65CL1 Gm45244-201ENSMUST00000211328 2200 ntBASIC19.63■□□□□ 0.73
Ctnna3Q65CL1 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Ctnna3Q65CL1 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Ctnna3Q65CL1 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ctnna3Q65CL1 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ctnna3Q65CL1 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ctnna3Q65CL1 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC19.62■□□□□ 0.73
Ctnna3Q65CL1 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ctnna3Q65CL1 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ctnna3Q65CL1 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ctnna3Q65CL1 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ctnna3Q65CL1 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Ctnna3Q65CL1 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ctnna3Q65CL1 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ctnna3Q65CL1 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ctnna3Q65CL1 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ctnna3Q65CL1 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Ctnna3Q65CL1 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
Ctnna3Q65CL1 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ctnna3Q65CL1 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ctnna3Q65CL1 Gm5417-201ENSMUST00000079706 384 ntBASIC19.61■□□□□ 0.73
Ctnna3Q65CL1 Fcho2-208ENSMUST00000224992 2964 ntBASIC19.61■□□□□ 0.73
Ctnna3Q65CL1 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC19.61■□□□□ 0.73
Ctnna3Q65CL1 Zcchc6-207ENSMUST00000225576 2499 ntBASIC19.61■□□□□ 0.73
Ctnna3Q65CL1 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ctnna3Q65CL1 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms