Protein–RNA interactions for Protein: Q62247

Sox16, Protein SOX-16 (Fragment), mousemouse

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox16Q62247 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
Sox16Q62247 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Sox16Q62247 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Sox16Q62247 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC9.95□□□□□ -0.82
Sox16Q62247 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
Sox16Q62247 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Sox16Q62247 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC9.95□□□□□ -0.82
Sox16Q62247 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Sox16Q62247 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Sox16Q62247 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Sox16Q62247 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Sox16Q62247 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Sox16Q62247 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Sox16Q62247 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Sox16Q62247 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Sox16Q62247 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Sox16Q62247 BC043934-202ENSMUST00000185694 2356 ntBASIC9.94□□□□□ -0.82
Sox16Q62247 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Sox16Q62247 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Sox16Q62247 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Sox16Q62247 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Sox16Q62247 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Sox16Q62247 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Sox16Q62247 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC9.94□□□□□ -0.82
Sox16Q62247 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Sox16Q62247 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Sox16Q62247 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC9.94□□□□□ -0.82
Sox16Q62247 Ankra2-208ENSMUST00000226100 1476 ntBASIC9.94□□□□□ -0.82
Sox16Q62247 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Sox16Q62247 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Sox16Q62247 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Sox16Q62247 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Sox16Q62247 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Sox16Q62247 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Sox16Q62247 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Sox16Q62247 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Sox16Q62247 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Sox16Q62247 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Sox16Q62247 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Sox16Q62247 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC9.94□□□□□ -0.82
Sox16Q62247 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Sox16Q62247 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Sox16Q62247 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC9.93□□□□□ -0.82
Sox16Q62247 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Sox16Q62247 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC9.93□□□□□ -0.82
Sox16Q62247 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Sox16Q62247 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Sox16Q62247 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Sox16Q62247 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Sox16Q62247 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
Sox16Q62247 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Sox16Q62247 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Sox16Q62247 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Sox16Q62247 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Sox16Q62247 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC9.93□□□□□ -0.82
Sox16Q62247 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Sox16Q62247 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Sox16Q62247 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Sox16Q62247 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Sox16Q62247 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Sox16Q62247 Gm37019-201ENSMUST00000192133 2134 ntBASIC9.93□□□□□ -0.82
Sox16Q62247 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Sox16Q62247 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Sox16Q62247 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Sox16Q62247 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Sox16Q62247 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Sox16Q62247 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC9.93□□□□□ -0.82
Sox16Q62247 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Sox16Q62247 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Sox16Q62247 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Sox16Q62247 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Sox16Q62247 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Sox16Q62247 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Sox16Q62247 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC9.92□□□□□ -0.82
Sox16Q62247 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
Sox16Q62247 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Sox16Q62247 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Sox16Q62247 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Sox16Q62247 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Sox16Q62247 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Sox16Q62247 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC9.92□□□□□ -0.82
Sox16Q62247 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC9.92□□□□□ -0.82
Sox16Q62247 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Sox16Q62247 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Sox16Q62247 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Sox16Q62247 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Sox16Q62247 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Sox16Q62247 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC9.92□□□□□ -0.82
Sox16Q62247 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Sox16Q62247 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Sox16Q62247 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Sox16Q62247 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Sox16Q62247 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Sox16Q62247 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Sox16Q62247 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Sox16Q62247 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
Sox16Q62247 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Sox16Q62247 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Sox16Q62247 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Sox16Q62247 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms