Protein–RNA interactions for Protein: Q61818

Rai1, Retinoic acid-induced protein 1, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rai1Q61818 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rai1Q61818 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rai1Q61818 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rai1Q61818 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Rai1Q61818 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rai1Q61818 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rai1Q61818 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rai1Q61818 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rai1Q61818 Mir3081-201ENSMUST00000175305 84 ntBASIC16.87■□□□□ 0.29
Rai1Q61818 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Rai1Q61818 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rai1Q61818 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rai1Q61818 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rai1Q61818 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rai1Q61818 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rai1Q61818 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC16.87■□□□□ 0.29
Rai1Q61818 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rai1Q61818 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC16.86■□□□□ 0.29
Rai1Q61818 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Rai1Q61818 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rai1Q61818 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC16.86■□□□□ 0.29
Rai1Q61818 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Rai1Q61818 AC133598.3-202ENSMUST00000224219 531 ntBASIC16.86■□□□□ 0.29
Rai1Q61818 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rai1Q61818 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rai1Q61818 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Rai1Q61818 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rai1Q61818 Gm26039-201ENSMUST00000158152 144 ntBASIC16.86■□□□□ 0.29
Rai1Q61818 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC16.86■□□□□ 0.29
Rai1Q61818 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rai1Q61818 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Rai1Q61818 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rai1Q61818 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rai1Q61818 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rai1Q61818 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Rai1Q61818 AC123834.2-201ENSMUST00000224038 2340 ntBASIC16.85■□□□□ 0.29
Rai1Q61818 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Rai1Q61818 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rai1Q61818 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC16.85■□□□□ 0.29
Rai1Q61818 AC164629.2-201ENSMUST00000217916 270 ntBASIC16.85■□□□□ 0.29
Rai1Q61818 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rai1Q61818 Spr-ps1-201ENSMUST00000089584 605 ntBASIC16.85■□□□□ 0.29
Rai1Q61818 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rai1Q61818 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC16.85■□□□□ 0.29
Rai1Q61818 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rai1Q61818 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Rai1Q61818 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Rai1Q61818 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC16.84■□□□□ 0.29
Rai1Q61818 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC16.84■□□□□ 0.29
Rai1Q61818 Gm34391-201ENSMUST00000203706 907 ntBASIC16.84■□□□□ 0.29
Rai1Q61818 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Rai1Q61818 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC16.84■□□□□ 0.29
Rai1Q61818 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rai1Q61818 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rai1Q61818 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC16.84■□□□□ 0.29
Rai1Q61818 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Rai1Q61818 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Rai1Q61818 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rai1Q61818 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Rai1Q61818 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rai1Q61818 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rai1Q61818 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rai1Q61818 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rai1Q61818 Gm24589-201ENSMUST00000116692 94 ntBASIC16.84■□□□□ 0.29
Rai1Q61818 Gm44771-201ENSMUST00000206975 626 ntBASIC16.84■□□□□ 0.29
Rai1Q61818 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
Rai1Q61818 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rai1Q61818 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rai1Q61818 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rai1Q61818 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rai1Q61818 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Rai1Q61818 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Rai1Q61818 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rai1Q61818 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rai1Q61818 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rai1Q61818 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC16.83■□□□□ 0.28
Rai1Q61818 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Rai1Q61818 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rai1Q61818 Gm45141-201ENSMUST00000206502 1888 ntBASIC16.83■□□□□ 0.28
Rai1Q61818 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Rai1Q61818 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rai1Q61818 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rai1Q61818 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC16.82■□□□□ 0.28
Rai1Q61818 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC16.82■□□□□ 0.28
Rai1Q61818 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rai1Q61818 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Rai1Q61818 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC16.82■□□□□ 0.28
Rai1Q61818 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Rai1Q61818 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rai1Q61818 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Rai1Q61818 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Rai1Q61818 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rai1Q61818 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rai1Q61818 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rai1Q61818 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Rai1Q61818 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rai1Q61818 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC16.82■□□□□ 0.28
Rai1Q61818 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC16.82■□□□□ 0.28
Rai1Q61818 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Rai1Q61818 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms