Protein–RNA interactions for Protein: Q61418

Clcn4, H(+)/Cl(-) exchange transporter 4, mousemouse

Predictions only

Length 747 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn4Q61418 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Clcn4Q61418 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Clcn4Q61418 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Clcn4Q61418 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Clcn4Q61418 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Clcn4Q61418 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC16.1■□□□□ 0.17
Clcn4Q61418 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Clcn4Q61418 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Clcn4Q61418 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC16.1■□□□□ 0.17
Clcn4Q61418 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Clcn4Q61418 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Clcn4Q61418 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Clcn4Q61418 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Clcn4Q61418 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Clcn4Q61418 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
Clcn4Q61418 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC16.1■□□□□ 0.17
Clcn4Q61418 Gm13168-201ENSMUST00000121771 632 ntBASIC16.1■□□□□ 0.17
Clcn4Q61418 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC16.1■□□□□ 0.17
Clcn4Q61418 Gm26524-201ENSMUST00000192339 390 ntBASIC16.1■□□□□ 0.17
Clcn4Q61418 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC16.1■□□□□ 0.17
Clcn4Q61418 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Clcn4Q61418 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Clcn4Q61418 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Clcn4Q61418 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Clcn4Q61418 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC16.1■□□□□ 0.17
Clcn4Q61418 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Clcn4Q61418 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Clcn4Q61418 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Clcn4Q61418 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Clcn4Q61418 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Clcn4Q61418 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Clcn4Q61418 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Clcn4Q61418 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Clcn4Q61418 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Clcn4Q61418 Gm38345-201ENSMUST00000192635 1748 ntBASIC16.09■□□□□ 0.17
Clcn4Q61418 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Clcn4Q61418 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Clcn4Q61418 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Clcn4Q61418 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Clcn4Q61418 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC16.09■□□□□ 0.17
Clcn4Q61418 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC16.09■□□□□ 0.17
Clcn4Q61418 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC16.09■□□□□ 0.17
Clcn4Q61418 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Clcn4Q61418 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Clcn4Q61418 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Clcn4Q61418 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Clcn4Q61418 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Clcn4Q61418 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Clcn4Q61418 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Clcn4Q61418 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Clcn4Q61418 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Clcn4Q61418 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC16.09■□□□□ 0.17
Clcn4Q61418 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC16.09■□□□□ 0.17
Clcn4Q61418 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Clcn4Q61418 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Clcn4Q61418 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Clcn4Q61418 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC16.08■□□□□ 0.16
Clcn4Q61418 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Clcn4Q61418 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Clcn4Q61418 Trmt13-210ENSMUST00000198454 880 ntBASIC16.08■□□□□ 0.16
Clcn4Q61418 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Clcn4Q61418 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Clcn4Q61418 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Clcn4Q61418 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Clcn4Q61418 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Clcn4Q61418 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Clcn4Q61418 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC16.08■□□□□ 0.16
Clcn4Q61418 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Clcn4Q61418 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Clcn4Q61418 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Clcn4Q61418 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Clcn4Q61418 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Clcn4Q61418 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Clcn4Q61418 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Clcn4Q61418 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Clcn4Q61418 Gm15635-204ENSMUST00000208024 2539 ntBASIC16.07■□□□□ 0.16
Clcn4Q61418 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Clcn4Q61418 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Clcn4Q61418 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Clcn4Q61418 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC16.07■□□□□ 0.16
Clcn4Q61418 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC16.07■□□□□ 0.16
Clcn4Q61418 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Clcn4Q61418 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Clcn4Q61418 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
Clcn4Q61418 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Clcn4Q61418 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Clcn4Q61418 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Clcn4Q61418 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Clcn4Q61418 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Clcn4Q61418 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Clcn4Q61418 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Clcn4Q61418 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Clcn4Q61418 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Clcn4Q61418 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Clcn4Q61418 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Clcn4Q61418 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Clcn4Q61418 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Clcn4Q61418 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Clcn4Q61418 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Clcn4Q61418 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms