Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
Ift88Q61371 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ift88Q61371 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
Ift88Q61371 Gm45244-201ENSMUST00000211328 2200 ntBASIC19.37■□□□□ 0.69
Ift88Q61371 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ift88Q61371 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ift88Q61371 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Ift88Q61371 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ift88Q61371 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ift88Q61371 Wnt10b-205ENSMUST00000226846 1204 ntBASIC19.37■□□□□ 0.69
Ift88Q61371 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ift88Q61371 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
Ift88Q61371 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ift88Q61371 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ift88Q61371 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ift88Q61371 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ift88Q61371 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ift88Q61371 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ift88Q61371 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Ift88Q61371 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ift88Q61371 Gm10849-201ENSMUST00000100397 618 ntBASIC19.36■□□□□ 0.69
Ift88Q61371 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ift88Q61371 Gm26571-201ENSMUST00000181399 666 ntBASIC19.36■□□□□ 0.69
Ift88Q61371 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Ift88Q61371 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ift88Q61371 Gm43548-201ENSMUST00000197139 2353 ntBASIC19.36■□□□□ 0.69
Ift88Q61371 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Ift88Q61371 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC19.36■□□□□ 0.69
Ift88Q61371 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Ift88Q61371 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ift88Q61371 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ift88Q61371 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ift88Q61371 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ift88Q61371 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ift88Q61371 AC125311.2-201ENSMUST00000227477 1940 ntBASIC19.35■□□□□ 0.69
Ift88Q61371 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ift88Q61371 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC19.35■□□□□ 0.69
Ift88Q61371 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ift88Q61371 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ift88Q61371 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Ift88Q61371 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC19.35■□□□□ 0.69
Ift88Q61371 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ift88Q61371 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Ift88Q61371 Gm37820-201ENSMUST00000194021 2147 ntBASIC19.35■□□□□ 0.69
Ift88Q61371 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ift88Q61371 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ift88Q61371 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ift88Q61371 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Ift88Q61371 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Ift88Q61371 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Ift88Q61371 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC19.35■□□□□ 0.69
Ift88Q61371 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Ift88Q61371 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ift88Q61371 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Ift88Q61371 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ift88Q61371 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Ift88Q61371 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Ift88Q61371 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ift88Q61371 Flg-201ENSMUST00000050758 1488 ntBASIC19.34■□□□□ 0.69
Ift88Q61371 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ift88Q61371 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ift88Q61371 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ift88Q61371 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Ift88Q61371 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ift88Q61371 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ift88Q61371 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Ift88Q61371 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC19.33■□□□□ 0.68
Ift88Q61371 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Ift88Q61371 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ift88Q61371 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ift88Q61371 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Ift88Q61371 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ift88Q61371 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Ift88Q61371 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC19.33■□□□□ 0.68
Ift88Q61371 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Ift88Q61371 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ift88Q61371 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Ift88Q61371 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC19.33■□□□□ 0.68
Ift88Q61371 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ift88Q61371 Gm43272-201ENSMUST00000200599 1584 ntBASIC19.32■□□□□ 0.68
Ift88Q61371 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ift88Q61371 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Ift88Q61371 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ift88Q61371 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC19.32■□□□□ 0.68
Ift88Q61371 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Ift88Q61371 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
Ift88Q61371 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ift88Q61371 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Ift88Q61371 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ift88Q61371 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Ift88Q61371 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Ift88Q61371 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Ift88Q61371 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ift88Q61371 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ift88Q61371 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ift88Q61371 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Ift88Q61371 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ift88Q61371 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ift88Q61371 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ift88Q61371 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms