Protein–RNA interactions for Protein: Q61180

Scnn1a, Amiloride-sensitive sodium channel subunit alpha, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scnn1aQ61180 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Scnn1aQ61180 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Scnn1aQ61180 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Scnn1aQ61180 AA414768-201ENSMUST00000121924 1257 ntBASIC20.13■□□□□ 0.81
Scnn1aQ61180 Gm6728-201ENSMUST00000178117 1065 ntBASIC20.13■□□□□ 0.81
Scnn1aQ61180 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Scnn1aQ61180 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Scnn1aQ61180 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC20.13■□□□□ 0.81
Scnn1aQ61180 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Scnn1aQ61180 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Scnn1aQ61180 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
Scnn1aQ61180 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Scnn1aQ61180 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Scnn1aQ61180 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Scnn1aQ61180 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Scnn1aQ61180 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Scnn1aQ61180 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Scnn1aQ61180 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Scnn1aQ61180 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC20.12■□□□□ 0.81
Scnn1aQ61180 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Scnn1aQ61180 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC20.12■□□□□ 0.81
Scnn1aQ61180 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Scnn1aQ61180 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Scnn1aQ61180 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Scnn1aQ61180 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC20.11■□□□□ 0.81
Scnn1aQ61180 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Scnn1aQ61180 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Scnn1aQ61180 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC20.11■□□□□ 0.81
Scnn1aQ61180 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Scnn1aQ61180 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Scnn1aQ61180 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC20.11■□□□□ 0.81
Scnn1aQ61180 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC20.11■□□□□ 0.81
Scnn1aQ61180 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Scnn1aQ61180 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC20.11■□□□□ 0.81
Scnn1aQ61180 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Scnn1aQ61180 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC20.11■□□□□ 0.81
Scnn1aQ61180 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Scnn1aQ61180 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Scnn1aQ61180 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Scnn1aQ61180 Gm5828-201ENSMUST00000071842 1860 ntBASIC20.11■□□□□ 0.81
Scnn1aQ61180 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Scnn1aQ61180 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Scnn1aQ61180 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Scnn1aQ61180 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Scnn1aQ61180 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Scnn1aQ61180 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC20.1■□□□□ 0.81
Scnn1aQ61180 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Scnn1aQ61180 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Scnn1aQ61180 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC20.1■□□□□ 0.81
Scnn1aQ61180 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC20.1■□□□□ 0.81
Scnn1aQ61180 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC20.1■□□□□ 0.81
Scnn1aQ61180 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Scnn1aQ61180 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC20.1■□□□□ 0.81
Scnn1aQ61180 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Scnn1aQ61180 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Scnn1aQ61180 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Scnn1aQ61180 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC20.1■□□□□ 0.81
Scnn1aQ61180 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Scnn1aQ61180 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Scnn1aQ61180 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Scnn1aQ61180 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Scnn1aQ61180 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Scnn1aQ61180 Gm6345-202ENSMUST00000180900 204 ntBASIC20.09■□□□□ 0.81
Scnn1aQ61180 Gm7213-201ENSMUST00000215977 950 ntBASIC20.09■□□□□ 0.81
Scnn1aQ61180 Gm21559-201ENSMUST00000220638 855 ntBASIC20.09■□□□□ 0.81
Scnn1aQ61180 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Scnn1aQ61180 Gm8587-201ENSMUST00000076538 843 ntBASIC20.09■□□□□ 0.81
Scnn1aQ61180 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC20.09■□□□□ 0.81
Scnn1aQ61180 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Scnn1aQ61180 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Scnn1aQ61180 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Scnn1aQ61180 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Scnn1aQ61180 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Scnn1aQ61180 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC20.08■□□□□ 0.81
Scnn1aQ61180 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Scnn1aQ61180 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Scnn1aQ61180 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
Scnn1aQ61180 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
Scnn1aQ61180 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Scnn1aQ61180 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Scnn1aQ61180 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Scnn1aQ61180 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Scnn1aQ61180 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
Scnn1aQ61180 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Scnn1aQ61180 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Scnn1aQ61180 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Scnn1aQ61180 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Scnn1aQ61180 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Scnn1aQ61180 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Scnn1aQ61180 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Scnn1aQ61180 Gm27389-201ENSMUST00000183622 195 ntBASIC20.07■□□□□ 0.8
Scnn1aQ61180 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC20.07■□□□□ 0.8
Scnn1aQ61180 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC20.07■□□□□ 0.8
Scnn1aQ61180 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Scnn1aQ61180 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Scnn1aQ61180 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Scnn1aQ61180 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Scnn1aQ61180 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Scnn1aQ61180 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Scnn1aQ61180 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms