Protein–RNA interactions for Protein: Q61115

Ptch1, Protein patched homolog 1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptch1Q61115 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Ptch1Q61115 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC25.28■■□□□ 1.64
Ptch1Q61115 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Ptch1Q61115 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC25.27■■□□□ 1.64
Ptch1Q61115 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
Ptch1Q61115 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC25.27■■□□□ 1.64
Ptch1Q61115 Gm11594-201ENSMUST00000122313 162 ntBASIC25.27■■□□□ 1.64
Ptch1Q61115 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
Ptch1Q61115 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC25.27■■□□□ 1.64
Ptch1Q61115 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC25.27■■□□□ 1.64
Ptch1Q61115 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC25.27■■□□□ 1.64
Ptch1Q61115 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC25.27■■□□□ 1.64
Ptch1Q61115 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Ptch1Q61115 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC25.26■■□□□ 1.63
Ptch1Q61115 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Ptch1Q61115 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Ptch1Q61115 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC25.26■■□□□ 1.63
Ptch1Q61115 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC25.26■■□□□ 1.63
Ptch1Q61115 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC25.26■■□□□ 1.63
Ptch1Q61115 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Ptch1Q61115 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Ptch1Q61115 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC25.25■■□□□ 1.63
Ptch1Q61115 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC25.25■■□□□ 1.63
Ptch1Q61115 Gm12644-201ENSMUST00000119935 606 ntBASIC25.25■■□□□ 1.63
Ptch1Q61115 Mir5131-201ENSMUST00000175426 93 ntBASIC25.25■■□□□ 1.63
Ptch1Q61115 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC25.25■■□□□ 1.63
Ptch1Q61115 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
Ptch1Q61115 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC25.25■■□□□ 1.63
Ptch1Q61115 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Ptch1Q61115 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC25.25■■□□□ 1.63
Ptch1Q61115 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC25.25■■□□□ 1.63
Ptch1Q61115 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Ptch1Q61115 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC25.25■■□□□ 1.63
Ptch1Q61115 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC25.24■■□□□ 1.63
Ptch1Q61115 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Ptch1Q61115 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC25.24■■□□□ 1.63
Ptch1Q61115 Gm44357-201ENSMUST00000195897 142 ntBASIC25.24■■□□□ 1.63
Ptch1Q61115 Gm19658-201ENSMUST00000196231 138 ntBASIC25.24■■□□□ 1.63
Ptch1Q61115 Gm44367-201ENSMUST00000196836 138 ntBASIC25.24■■□□□ 1.63
Ptch1Q61115 Gm44350-201ENSMUST00000197197 138 ntBASIC25.24■■□□□ 1.63
Ptch1Q61115 Gm44390-201ENSMUST00000197533 144 ntBASIC25.24■■□□□ 1.63
Ptch1Q61115 Gm44313-201ENSMUST00000198018 138 ntBASIC25.24■■□□□ 1.63
Ptch1Q61115 Gm44486-201ENSMUST00000198508 138 ntBASIC25.24■■□□□ 1.63
Ptch1Q61115 Gm44454-201ENSMUST00000198541 138 ntBASIC25.24■■□□□ 1.63
Ptch1Q61115 Gm44314-201ENSMUST00000199263 138 ntBASIC25.24■■□□□ 1.63
Ptch1Q61115 Gm44394-201ENSMUST00000199558 138 ntBASIC25.24■■□□□ 1.63
Ptch1Q61115 Gm44484-201ENSMUST00000199873 138 ntBASIC25.24■■□□□ 1.63
Ptch1Q61115 Gm44466-201ENSMUST00000200264 138 ntBASIC25.24■■□□□ 1.63
Ptch1Q61115 Gm44359-201ENSMUST00000200671 138 ntBASIC25.24■■□□□ 1.63
Ptch1Q61115 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
Ptch1Q61115 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Ptch1Q61115 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC25.24■■□□□ 1.63
Ptch1Q61115 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC25.24■■□□□ 1.63
Ptch1Q61115 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC25.24■■□□□ 1.63
Ptch1Q61115 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC25.24■■□□□ 1.63
Ptch1Q61115 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC25.23■■□□□ 1.63
Ptch1Q61115 Gm43332-201ENSMUST00000202511 1044 ntBASIC25.23■■□□□ 1.63
Ptch1Q61115 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
Ptch1Q61115 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Ptch1Q61115 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC25.23■■□□□ 1.63
Ptch1Q61115 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC25.23■■□□□ 1.63
Ptch1Q61115 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Ptch1Q61115 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
Ptch1Q61115 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC25.22■■□□□ 1.63
Ptch1Q61115 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC25.22■■□□□ 1.63
Ptch1Q61115 Gm1818-201ENSMUST00000169406 1184 ntBASIC25.22■■□□□ 1.63
Ptch1Q61115 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
Ptch1Q61115 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC25.22■■□□□ 1.63
Ptch1Q61115 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
Ptch1Q61115 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC25.22■■□□□ 1.63
Ptch1Q61115 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC25.21■■□□□ 1.63
Ptch1Q61115 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC25.21■■□□□ 1.63
Ptch1Q61115 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Ptch1Q61115 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC25.21■■□□□ 1.63
Ptch1Q61115 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC25.21■■□□□ 1.63
Ptch1Q61115 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Ptch1Q61115 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC25.21■■□□□ 1.63
Ptch1Q61115 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC25.21■■□□□ 1.63
Ptch1Q61115 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
Ptch1Q61115 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC25.21■■□□□ 1.63
Ptch1Q61115 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
Ptch1Q61115 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Ptch1Q61115 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Ptch1Q61115 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC25.21■■□□□ 1.63
Ptch1Q61115 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Ptch1Q61115 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
Ptch1Q61115 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Ptch1Q61115 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC25.21■■□□□ 1.63
Ptch1Q61115 Gm11336-201ENSMUST00000118168 334 ntBASIC25.2■■□□□ 1.63
Ptch1Q61115 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC25.2■■□□□ 1.63
Ptch1Q61115 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.63
Ptch1Q61115 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.63
Ptch1Q61115 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.63
Ptch1Q61115 Gm37374-201ENSMUST00000194954 1829 ntBASIC25.2■■□□□ 1.63
Ptch1Q61115 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC25.2■■□□□ 1.62
Ptch1Q61115 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
Ptch1Q61115 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC25.2■■□□□ 1.62
Ptch1Q61115 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Ptch1Q61115 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
Ptch1Q61115 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC25.2■■□□□ 1.62
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms