Protein–RNA interactions for Protein: Q61107

Gbp4, Guanylate-binding protein 4, mousemouse

Predictions only

Length 620 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gbp4Q61107 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Gbp4Q61107 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC18.37■□□□□ 0.53
Gbp4Q61107 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Gbp4Q61107 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Gbp4Q61107 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Gbp4Q61107 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Gbp4Q61107 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Gbp4Q61107 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Gbp4Q61107 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Gbp4Q61107 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC18.37■□□□□ 0.53
Gbp4Q61107 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Gbp4Q61107 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Gbp4Q61107 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Gbp4Q61107 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Gbp4Q61107 Gm8309-201ENSMUST00000206627 1448 ntBASIC18.36■□□□□ 0.53
Gbp4Q61107 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Gbp4Q61107 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Gbp4Q61107 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Gbp4Q61107 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Gbp4Q61107 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Gbp4Q61107 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gbp4Q61107 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gbp4Q61107 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Gbp4Q61107 Gm43672-201ENSMUST00000199072 1731 ntBASIC18.35■□□□□ 0.53
Gbp4Q61107 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gbp4Q61107 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC18.35■□□□□ 0.53
Gbp4Q61107 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC18.35■□□□□ 0.53
Gbp4Q61107 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC18.35■□□□□ 0.53
Gbp4Q61107 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gbp4Q61107 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Gbp4Q61107 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gbp4Q61107 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gbp4Q61107 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Gbp4Q61107 Slc35b2-207ENSMUST00000226086 850 ntBASIC18.35■□□□□ 0.53
Gbp4Q61107 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Gbp4Q61107 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gbp4Q61107 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gbp4Q61107 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gbp4Q61107 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gbp4Q61107 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gbp4Q61107 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gbp4Q61107 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC18.35■□□□□ 0.53
Gbp4Q61107 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gbp4Q61107 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Gbp4Q61107 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Gbp4Q61107 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Gbp4Q61107 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Gbp4Q61107 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Gbp4Q61107 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Gbp4Q61107 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC18.34■□□□□ 0.53
Gbp4Q61107 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Gbp4Q61107 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Gbp4Q61107 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Gbp4Q61107 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Gbp4Q61107 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Gbp4Q61107 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC18.33■□□□□ 0.53
Gbp4Q61107 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Gbp4Q61107 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Gbp4Q61107 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Gbp4Q61107 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Gbp4Q61107 AC107452.1-201ENSMUST00000227963 481 ntBASIC18.33■□□□□ 0.52
Gbp4Q61107 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Gbp4Q61107 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Gbp4Q61107 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Gbp4Q61107 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC18.33■□□□□ 0.52
Gbp4Q61107 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC18.33■□□□□ 0.52
Gbp4Q61107 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Gbp4Q61107 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gbp4Q61107 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gbp4Q61107 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gbp4Q61107 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gbp4Q61107 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gbp4Q61107 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Gbp4Q61107 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC18.32■□□□□ 0.52
Gbp4Q61107 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
Gbp4Q61107 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC18.32■□□□□ 0.52
Gbp4Q61107 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gbp4Q61107 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Gbp4Q61107 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gbp4Q61107 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Gbp4Q61107 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Gbp4Q61107 AC121961.1-201ENSMUST00000218594 1779 ntBASIC18.32■□□□□ 0.52
Gbp4Q61107 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Gbp4Q61107 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Gbp4Q61107 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gbp4Q61107 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC18.31■□□□□ 0.52
Gbp4Q61107 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gbp4Q61107 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Gbp4Q61107 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gbp4Q61107 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gbp4Q61107 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gbp4Q61107 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Gbp4Q61107 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gbp4Q61107 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC18.3■□□□□ 0.52
Gbp4Q61107 Gm10849-201ENSMUST00000100397 618 ntBASIC18.3■□□□□ 0.52
Gbp4Q61107 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC18.3■□□□□ 0.52
Gbp4Q61107 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Gbp4Q61107 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Gbp4Q61107 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Gbp4Q61107 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC18.3■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms