Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Shroom1Q5SX79 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Shroom1Q5SX79 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Shroom1Q5SX79 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Shroom1Q5SX79 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Shroom1Q5SX79 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Shroom1Q5SX79 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Shroom1Q5SX79 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Shroom1Q5SX79 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC18.57■□□□□ 0.56
Shroom1Q5SX79 Gm12085-201ENSMUST00000119263 940 ntBASIC18.57■□□□□ 0.56
Shroom1Q5SX79 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC18.57■□□□□ 0.56
Shroom1Q5SX79 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Shroom1Q5SX79 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC18.57■□□□□ 0.56
Shroom1Q5SX79 Gm45058-201ENSMUST00000205810 766 ntBASIC18.57■□□□□ 0.56
Shroom1Q5SX79 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Shroom1Q5SX79 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Shroom1Q5SX79 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Shroom1Q5SX79 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Shroom1Q5SX79 Gm43702-201ENSMUST00000198772 2546 ntBASIC18.56■□□□□ 0.56
Shroom1Q5SX79 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC18.56■□□□□ 0.56
Shroom1Q5SX79 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Shroom1Q5SX79 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Shroom1Q5SX79 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Shroom1Q5SX79 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Shroom1Q5SX79 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Shroom1Q5SX79 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Shroom1Q5SX79 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Shroom1Q5SX79 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Shroom1Q5SX79 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Shroom1Q5SX79 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Shroom1Q5SX79 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Shroom1Q5SX79 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Shroom1Q5SX79 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Shroom1Q5SX79 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Shroom1Q5SX79 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Shroom1Q5SX79 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.55■□□□□ 0.56
Shroom1Q5SX79 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Shroom1Q5SX79 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC18.55■□□□□ 0.56
Shroom1Q5SX79 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Shroom1Q5SX79 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Shroom1Q5SX79 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Shroom1Q5SX79 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Shroom1Q5SX79 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC18.55■□□□□ 0.56
Shroom1Q5SX79 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Shroom1Q5SX79 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Shroom1Q5SX79 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Shroom1Q5SX79 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC18.55■□□□□ 0.56
Shroom1Q5SX79 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Shroom1Q5SX79 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Shroom1Q5SX79 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Shroom1Q5SX79 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Shroom1Q5SX79 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Shroom1Q5SX79 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Shroom1Q5SX79 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC18.54■□□□□ 0.56
Shroom1Q5SX79 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Shroom1Q5SX79 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Shroom1Q5SX79 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Shroom1Q5SX79 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Shroom1Q5SX79 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC18.54■□□□□ 0.56
Shroom1Q5SX79 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Shroom1Q5SX79 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC18.54■□□□□ 0.56
Shroom1Q5SX79 Gm18032-201ENSMUST00000222541 538 ntBASIC18.54■□□□□ 0.56
Shroom1Q5SX79 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Shroom1Q5SX79 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Shroom1Q5SX79 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Shroom1Q5SX79 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Shroom1Q5SX79 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Shroom1Q5SX79 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Shroom1Q5SX79 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Shroom1Q5SX79 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Shroom1Q5SX79 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Shroom1Q5SX79 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
Shroom1Q5SX79 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Shroom1Q5SX79 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC18.53■□□□□ 0.56
Shroom1Q5SX79 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Shroom1Q5SX79 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC18.53■□□□□ 0.56
Shroom1Q5SX79 Gm9694-201ENSMUST00000193347 1189 ntBASIC18.53■□□□□ 0.56
Shroom1Q5SX79 Gm43353-201ENSMUST00000199224 1295 ntBASIC18.53■□□□□ 0.56
Shroom1Q5SX79 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Shroom1Q5SX79 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Shroom1Q5SX79 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Shroom1Q5SX79 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.53■□□□□ 0.56
Shroom1Q5SX79 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Shroom1Q5SX79 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Shroom1Q5SX79 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Shroom1Q5SX79 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Shroom1Q5SX79 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Shroom1Q5SX79 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Shroom1Q5SX79 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Shroom1Q5SX79 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Shroom1Q5SX79 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Shroom1Q5SX79 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Shroom1Q5SX79 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Shroom1Q5SX79 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Shroom1Q5SX79 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Shroom1Q5SX79 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Shroom1Q5SX79 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Shroom1Q5SX79 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Shroom1Q5SX79 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Shroom1Q5SX79 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms