Protein–RNA interactions for Protein: Q5R1I0

Trav6d-4, T cell receptor alpha variable 6D-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-4Q5R1I0 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC14.71□□□□□ -0.05
Trav6d-4Q5R1I0 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Trav6d-4Q5R1I0 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trav6d-4Q5R1I0 Fam105a-203ENSMUST00000226170 3043 ntBASIC14.71□□□□□ -0.05
Trav6d-4Q5R1I0 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav6d-4Q5R1I0 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trav6d-4Q5R1I0 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Trav6d-4Q5R1I0 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trav6d-4Q5R1I0 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trav6d-4Q5R1I0 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Trav6d-4Q5R1I0 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav6d-4Q5R1I0 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav6d-4Q5R1I0 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
Trav6d-4Q5R1I0 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav6d-4Q5R1I0 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC14.7□□□□□ -0.06
Trav6d-4Q5R1I0 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav6d-4Q5R1I0 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trav6d-4Q5R1I0 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav6d-4Q5R1I0 AC153881.2-201ENSMUST00000214877 204 ntBASIC14.7□□□□□ -0.06
Trav6d-4Q5R1I0 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav6d-4Q5R1I0 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav6d-4Q5R1I0 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC14.7□□□□□ -0.06
Trav6d-4Q5R1I0 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trav6d-4Q5R1I0 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav6d-4Q5R1I0 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav6d-4Q5R1I0 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC14.69□□□□□ -0.06
Trav6d-4Q5R1I0 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav6d-4Q5R1I0 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav6d-4Q5R1I0 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trav6d-4Q5R1I0 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav6d-4Q5R1I0 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav6d-4Q5R1I0 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav6d-4Q5R1I0 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trav6d-4Q5R1I0 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav6d-4Q5R1I0 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav6d-4Q5R1I0 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
Trav6d-4Q5R1I0 Gm43799-201ENSMUST00000201845 579 ntBASIC14.69□□□□□ -0.06
Trav6d-4Q5R1I0 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC14.69□□□□□ -0.06
Trav6d-4Q5R1I0 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav6d-4Q5R1I0 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav6d-4Q5R1I0 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC14.69□□□□□ -0.06
Trav6d-4Q5R1I0 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav6d-4Q5R1I0 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC14.69□□□□□ -0.06
Trav6d-4Q5R1I0 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav6d-4Q5R1I0 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav6d-4Q5R1I0 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trav6d-4Q5R1I0 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav6d-4Q5R1I0 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Trav6d-4Q5R1I0 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav6d-4Q5R1I0 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav6d-4Q5R1I0 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trav6d-4Q5R1I0 Gm24841-201ENSMUST00000158676 357 ntBASIC14.68□□□□□ -0.06
Trav6d-4Q5R1I0 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trav6d-4Q5R1I0 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC14.68□□□□□ -0.06
Trav6d-4Q5R1I0 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
Trav6d-4Q5R1I0 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav6d-4Q5R1I0 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
Trav6d-4Q5R1I0 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav6d-4Q5R1I0 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav6d-4Q5R1I0 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav6d-4Q5R1I0 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Trav6d-4Q5R1I0 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav6d-4Q5R1I0 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav6d-4Q5R1I0 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav6d-4Q5R1I0 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav6d-4Q5R1I0 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav6d-4Q5R1I0 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav6d-4Q5R1I0 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav6d-4Q5R1I0 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Trav6d-4Q5R1I0 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav6d-4Q5R1I0 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC14.67□□□□□ -0.06
Trav6d-4Q5R1I0 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
Trav6d-4Q5R1I0 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav6d-4Q5R1I0 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav6d-4Q5R1I0 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav6d-4Q5R1I0 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC14.67□□□□□ -0.06
Trav6d-4Q5R1I0 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trav6d-4Q5R1I0 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav6d-4Q5R1I0 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav6d-4Q5R1I0 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Trav6d-4Q5R1I0 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav6d-4Q5R1I0 Gm5828-201ENSMUST00000071842 1860 ntBASIC14.67□□□□□ -0.06
Trav6d-4Q5R1I0 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav6d-4Q5R1I0 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav6d-4Q5R1I0 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav6d-4Q5R1I0 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trav6d-4Q5R1I0 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trav6d-4Q5R1I0 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav6d-4Q5R1I0 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trav6d-4Q5R1I0 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav6d-4Q5R1I0 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
Trav6d-4Q5R1I0 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trav6d-4Q5R1I0 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav6d-4Q5R1I0 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC14.66□□□□□ -0.06
Trav6d-4Q5R1I0 Gm11539-201ENSMUST00000119837 557 ntBASIC14.66□□□□□ -0.06
Trav6d-4Q5R1I0 Gm13436-201ENSMUST00000120418 567 ntBASIC14.66□□□□□ -0.06
Trav6d-4Q5R1I0 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trav6d-4Q5R1I0 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
Trav6d-4Q5R1I0 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trav6d-4Q5R1I0 AC158538.1-201ENSMUST00000225870 294 ntBASIC14.66□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms