Protein–RNA interactions for Protein: Q5R1E6

Trav6-3, T cell receptor alpha variable 6-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-3Q5R1E6 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Trav6-3Q5R1E6 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav6-3Q5R1E6 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav6-3Q5R1E6 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav6-3Q5R1E6 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Trav6-3Q5R1E6 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trav6-3Q5R1E6 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Trav6-3Q5R1E6 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trav6-3Q5R1E6 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trav6-3Q5R1E6 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav6-3Q5R1E6 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Trav6-3Q5R1E6 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav6-3Q5R1E6 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav6-3Q5R1E6 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav6-3Q5R1E6 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Trav6-3Q5R1E6 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav6-3Q5R1E6 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav6-3Q5R1E6 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav6-3Q5R1E6 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav6-3Q5R1E6 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav6-3Q5R1E6 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav6-3Q5R1E6 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav6-3Q5R1E6 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Trav6-3Q5R1E6 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav6-3Q5R1E6 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC14.04□□□□□ -0.16
Trav6-3Q5R1E6 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav6-3Q5R1E6 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC14.04□□□□□ -0.16
Trav6-3Q5R1E6 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Trav6-3Q5R1E6 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
Trav6-3Q5R1E6 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav6-3Q5R1E6 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav6-3Q5R1E6 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Trav6-3Q5R1E6 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav6-3Q5R1E6 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Trav6-3Q5R1E6 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav6-3Q5R1E6 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav6-3Q5R1E6 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Trav6-3Q5R1E6 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav6-3Q5R1E6 AC125311.2-201ENSMUST00000227477 1940 ntBASIC14.03□□□□□ -0.16
Trav6-3Q5R1E6 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav6-3Q5R1E6 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav6-3Q5R1E6 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav6-3Q5R1E6 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav6-3Q5R1E6 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Trav6-3Q5R1E6 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav6-3Q5R1E6 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav6-3Q5R1E6 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trav6-3Q5R1E6 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav6-3Q5R1E6 Gm8495-201ENSMUST00000188740 694 ntBASIC14.03□□□□□ -0.16
Trav6-3Q5R1E6 Gm29241-201ENSMUST00000189260 1096 ntBASIC14.03□□□□□ -0.16
Trav6-3Q5R1E6 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC14.03□□□□□ -0.16
Trav6-3Q5R1E6 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav6-3Q5R1E6 Cxcl14-202ENSMUST00000224801 1467 ntBASIC14.03□□□□□ -0.16
Trav6-3Q5R1E6 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trav6-3Q5R1E6 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav6-3Q5R1E6 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav6-3Q5R1E6 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav6-3Q5R1E6 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav6-3Q5R1E6 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trav6-3Q5R1E6 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trav6-3Q5R1E6 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav6-3Q5R1E6 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav6-3Q5R1E6 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trav6-3Q5R1E6 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav6-3Q5R1E6 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav6-3Q5R1E6 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav6-3Q5R1E6 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Trav6-3Q5R1E6 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trav6-3Q5R1E6 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
Trav6-3Q5R1E6 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav6-3Q5R1E6 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav6-3Q5R1E6 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trav6-3Q5R1E6 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav6-3Q5R1E6 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav6-3Q5R1E6 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Trav6-3Q5R1E6 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC14.02□□□□□ -0.16
Trav6-3Q5R1E6 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav6-3Q5R1E6 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav6-3Q5R1E6 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.16
Trav6-3Q5R1E6 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trav6-3Q5R1E6 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav6-3Q5R1E6 Gm13401-201ENSMUST00000117074 291 ntBASIC14.02□□□□□ -0.17
Trav6-3Q5R1E6 Gm11643-201ENSMUST00000119578 864 ntBASIC14.02□□□□□ -0.17
Trav6-3Q5R1E6 Gm15847-201ENSMUST00000121417 1065 ntBASIC14.02□□□□□ -0.17
Trav6-3Q5R1E6 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav6-3Q5R1E6 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trav6-3Q5R1E6 Mir6349-201ENSMUST00000184059 97 ntBASIC14.02□□□□□ -0.17
Trav6-3Q5R1E6 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav6-3Q5R1E6 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav6-3Q5R1E6 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Trav6-3Q5R1E6 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
Trav6-3Q5R1E6 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Trav6-3Q5R1E6 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav6-3Q5R1E6 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Trav6-3Q5R1E6 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav6-3Q5R1E6 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav6-3Q5R1E6 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav6-3Q5R1E6 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav6-3Q5R1E6 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Trav6-3Q5R1E6 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms