Protein–RNA interactions for Protein: Q571H0

Urb1, Nucleolar pre-ribosomal-associated protein 1, mousemouse

Known RBP Predictions only

Length 2,274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Urb1Q571H0 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC16.06■□□□□ 0.16
Urb1Q571H0 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC16.06■□□□□ 0.16
Urb1Q571H0 Gm4974-201ENSMUST00000209974 875 ntBASIC16.06■□□□□ 0.16
Urb1Q571H0 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Urb1Q571H0 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
Urb1Q571H0 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Urb1Q571H0 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Urb1Q571H0 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
Urb1Q571H0 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Urb1Q571H0 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Urb1Q571H0 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC16.05■□□□□ 0.16
Urb1Q571H0 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Urb1Q571H0 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Urb1Q571H0 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Urb1Q571H0 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC16.05■□□□□ 0.16
Urb1Q571H0 Mzt1-203ENSMUST00000227948 952 ntBASIC16.05■□□□□ 0.16
Urb1Q571H0 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Urb1Q571H0 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Urb1Q571H0 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Urb1Q571H0 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Urb1Q571H0 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Urb1Q571H0 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Urb1Q571H0 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Urb1Q571H0 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Urb1Q571H0 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Urb1Q571H0 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Urb1Q571H0 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Urb1Q571H0 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Urb1Q571H0 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Urb1Q571H0 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Urb1Q571H0 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Urb1Q571H0 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Urb1Q571H0 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Urb1Q571H0 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC16.04■□□□□ 0.16
Urb1Q571H0 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Urb1Q571H0 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Urb1Q571H0 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Urb1Q571H0 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC16.04■□□□□ 0.16
Urb1Q571H0 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Urb1Q571H0 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Urb1Q571H0 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Urb1Q571H0 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Urb1Q571H0 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Urb1Q571H0 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Urb1Q571H0 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Urb1Q571H0 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Urb1Q571H0 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Urb1Q571H0 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Urb1Q571H0 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Urb1Q571H0 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Urb1Q571H0 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Urb1Q571H0 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
Urb1Q571H0 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Urb1Q571H0 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Urb1Q571H0 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Urb1Q571H0 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Urb1Q571H0 Gm25925-201ENSMUST00000158314 306 ntBASIC16.03■□□□□ 0.16
Urb1Q571H0 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC16.03■□□□□ 0.16
Urb1Q571H0 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Urb1Q571H0 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Urb1Q571H0 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Urb1Q571H0 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Urb1Q571H0 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Urb1Q571H0 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Urb1Q571H0 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.16
Urb1Q571H0 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC16.02■□□□□ 0.16
Urb1Q571H0 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC16.02■□□□□ 0.16
Urb1Q571H0 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC16.02■□□□□ 0.16
Urb1Q571H0 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC16.02■□□□□ 0.16
Urb1Q571H0 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Urb1Q571H0 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
Urb1Q571H0 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Urb1Q571H0 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Urb1Q571H0 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Urb1Q571H0 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Urb1Q571H0 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Urb1Q571H0 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Urb1Q571H0 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Urb1Q571H0 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Urb1Q571H0 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Urb1Q571H0 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Urb1Q571H0 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Urb1Q571H0 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Urb1Q571H0 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Urb1Q571H0 Gm9694-201ENSMUST00000193347 1189 ntBASIC16.01■□□□□ 0.15
Urb1Q571H0 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Urb1Q571H0 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Urb1Q571H0 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Urb1Q571H0 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Urb1Q571H0 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Urb1Q571H0 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
Urb1Q571H0 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Urb1Q571H0 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Urb1Q571H0 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Urb1Q571H0 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC16.01■□□□□ 0.15
Urb1Q571H0 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC16.01■□□□□ 0.15
Urb1Q571H0 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Urb1Q571H0 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Urb1Q571H0 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Urb1Q571H0 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms