Protein–RNA interactions for Protein: Q3V0S8

1700012B07Rik, MCG19638, isoform CRA_b, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
1700012B07RikQ3V0S8 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
1700012B07RikQ3V0S8 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
1700012B07RikQ3V0S8 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC16.3■□□□□ 0.2
1700012B07RikQ3V0S8 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
1700012B07RikQ3V0S8 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
1700012B07RikQ3V0S8 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
1700012B07RikQ3V0S8 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
1700012B07RikQ3V0S8 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
1700012B07RikQ3V0S8 Gm12085-201ENSMUST00000119263 940 ntBASIC16.29■□□□□ 0.2
1700012B07RikQ3V0S8 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
1700012B07RikQ3V0S8 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
1700012B07RikQ3V0S8 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC16.29■□□□□ 0.2
1700012B07RikQ3V0S8 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
1700012B07RikQ3V0S8 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC16.29■□□□□ 0.2
1700012B07RikQ3V0S8 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC16.29■□□□□ 0.2
1700012B07RikQ3V0S8 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
1700012B07RikQ3V0S8 Gm10252-201ENSMUST00000209541 832 ntBASIC16.29■□□□□ 0.2
1700012B07RikQ3V0S8 Timm23-208ENSMUST00000226683 750 ntBASIC16.29■□□□□ 0.2
1700012B07RikQ3V0S8 AC156016.1-201ENSMUST00000227190 1035 ntBASIC16.29■□□□□ 0.2
1700012B07RikQ3V0S8 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
1700012B07RikQ3V0S8 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
1700012B07RikQ3V0S8 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
1700012B07RikQ3V0S8 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
1700012B07RikQ3V0S8 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
1700012B07RikQ3V0S8 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
1700012B07RikQ3V0S8 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
1700012B07RikQ3V0S8 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
1700012B07RikQ3V0S8 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
1700012B07RikQ3V0S8 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
1700012B07RikQ3V0S8 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC16.29■□□□□ 0.2
1700012B07RikQ3V0S8 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
1700012B07RikQ3V0S8 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
1700012B07RikQ3V0S8 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
1700012B07RikQ3V0S8 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
1700012B07RikQ3V0S8 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC16.28■□□□□ 0.2
1700012B07RikQ3V0S8 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC16.28■□□□□ 0.2
1700012B07RikQ3V0S8 AL672049.1-201ENSMUST00000197943 91 ntBASIC16.28■□□□□ 0.2
1700012B07RikQ3V0S8 Gm21814-202ENSMUST00000203277 873 ntBASIC16.28■□□□□ 0.2
1700012B07RikQ3V0S8 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
1700012B07RikQ3V0S8 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
1700012B07RikQ3V0S8 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
1700012B07RikQ3V0S8 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
1700012B07RikQ3V0S8 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC16.28■□□□□ 0.2
1700012B07RikQ3V0S8 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
1700012B07RikQ3V0S8 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
1700012B07RikQ3V0S8 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
1700012B07RikQ3V0S8 AC125311.2-201ENSMUST00000227477 1940 ntBASIC16.27■□□□□ 0.2
1700012B07RikQ3V0S8 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
1700012B07RikQ3V0S8 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
1700012B07RikQ3V0S8 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
1700012B07RikQ3V0S8 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
1700012B07RikQ3V0S8 Gm37811-201ENSMUST00000192416 2601 ntBASIC16.27■□□□□ 0.2
1700012B07RikQ3V0S8 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
1700012B07RikQ3V0S8 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
1700012B07RikQ3V0S8 Otx2os1-204ENSMUST00000227221 751 ntBASIC16.27■□□□□ 0.2
1700012B07RikQ3V0S8 Odf3b-204ENSMUST00000227834 930 ntBASIC16.27■□□□□ 0.2
1700012B07RikQ3V0S8 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
1700012B07RikQ3V0S8 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
1700012B07RikQ3V0S8 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
1700012B07RikQ3V0S8 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
1700012B07RikQ3V0S8 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
1700012B07RikQ3V0S8 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
1700012B07RikQ3V0S8 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
1700012B07RikQ3V0S8 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
1700012B07RikQ3V0S8 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
1700012B07RikQ3V0S8 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
1700012B07RikQ3V0S8 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
1700012B07RikQ3V0S8 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
1700012B07RikQ3V0S8 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC16.27■□□□□ 0.19
1700012B07RikQ3V0S8 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
1700012B07RikQ3V0S8 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
1700012B07RikQ3V0S8 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
1700012B07RikQ3V0S8 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC16.26■□□□□ 0.19
1700012B07RikQ3V0S8 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
1700012B07RikQ3V0S8 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
1700012B07RikQ3V0S8 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
1700012B07RikQ3V0S8 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC16.26■□□□□ 0.19
1700012B07RikQ3V0S8 Arhgef4-208ENSMUST00000211073 171 ntBASIC16.26■□□□□ 0.19
1700012B07RikQ3V0S8 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC16.26■□□□□ 0.19
1700012B07RikQ3V0S8 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
1700012B07RikQ3V0S8 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
1700012B07RikQ3V0S8 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
1700012B07RikQ3V0S8 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
1700012B07RikQ3V0S8 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
1700012B07RikQ3V0S8 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
1700012B07RikQ3V0S8 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
1700012B07RikQ3V0S8 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC16.26■□□□□ 0.19
1700012B07RikQ3V0S8 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC16.26■□□□□ 0.19
1700012B07RikQ3V0S8 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC16.26■□□□□ 0.19
1700012B07RikQ3V0S8 Gm19721-201ENSMUST00000195284 1764 ntBASIC16.26■□□□□ 0.19
1700012B07RikQ3V0S8 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
1700012B07RikQ3V0S8 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
1700012B07RikQ3V0S8 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC16.25■□□□□ 0.19
1700012B07RikQ3V0S8 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
1700012B07RikQ3V0S8 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
1700012B07RikQ3V0S8 Gm9484-201ENSMUST00000195892 1159 ntBASIC16.25■□□□□ 0.19
1700012B07RikQ3V0S8 Gm3375-201ENSMUST00000203929 796 ntBASIC16.25■□□□□ 0.19
1700012B07RikQ3V0S8 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
1700012B07RikQ3V0S8 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC16.25■□□□□ 0.19
1700012B07RikQ3V0S8 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms