Protein–RNA interactions for Protein: Q3UTQ8

Cdkl5, Cyclin-dependent kinase-like 5, mousemouse

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl5Q3UTQ8 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Cdkl5Q3UTQ8 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Cdkl5Q3UTQ8 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Cdkl5Q3UTQ8 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cdkl5Q3UTQ8 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC20.27■□□□□ 0.84
Cdkl5Q3UTQ8 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Cdkl5Q3UTQ8 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cdkl5Q3UTQ8 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cdkl5Q3UTQ8 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC20.27■□□□□ 0.84
Cdkl5Q3UTQ8 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Cdkl5Q3UTQ8 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.83
Cdkl5Q3UTQ8 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cdkl5Q3UTQ8 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cdkl5Q3UTQ8 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cdkl5Q3UTQ8 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cdkl5Q3UTQ8 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cdkl5Q3UTQ8 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Cdkl5Q3UTQ8 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cdkl5Q3UTQ8 Gm12382-201ENSMUST00000122005 922 ntBASIC20.26■□□□□ 0.83
Cdkl5Q3UTQ8 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
Cdkl5Q3UTQ8 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC20.26■□□□□ 0.83
Cdkl5Q3UTQ8 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cdkl5Q3UTQ8 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Cdkl5Q3UTQ8 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Cdkl5Q3UTQ8 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC20.26■□□□□ 0.83
Cdkl5Q3UTQ8 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cdkl5Q3UTQ8 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC20.26■□□□□ 0.83
Cdkl5Q3UTQ8 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cdkl5Q3UTQ8 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Cdkl5Q3UTQ8 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cdkl5Q3UTQ8 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC20.26■□□□□ 0.83
Cdkl5Q3UTQ8 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC20.26■□□□□ 0.83
Cdkl5Q3UTQ8 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cdkl5Q3UTQ8 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Cdkl5Q3UTQ8 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cdkl5Q3UTQ8 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cdkl5Q3UTQ8 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cdkl5Q3UTQ8 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC20.25■□□□□ 0.83
Cdkl5Q3UTQ8 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC20.25■□□□□ 0.83
Cdkl5Q3UTQ8 Gm10653-202ENSMUST00000139570 835 ntBASIC20.25■□□□□ 0.83
Cdkl5Q3UTQ8 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cdkl5Q3UTQ8 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Cdkl5Q3UTQ8 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC20.25■□□□□ 0.83
Cdkl5Q3UTQ8 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cdkl5Q3UTQ8 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC20.25■□□□□ 0.83
Cdkl5Q3UTQ8 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cdkl5Q3UTQ8 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cdkl5Q3UTQ8 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC20.25■□□□□ 0.83
Cdkl5Q3UTQ8 Gm42900-201ENSMUST00000197184 2167 ntBASIC20.25■□□□□ 0.83
Cdkl5Q3UTQ8 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cdkl5Q3UTQ8 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cdkl5Q3UTQ8 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cdkl5Q3UTQ8 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cdkl5Q3UTQ8 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC20.24■□□□□ 0.83
Cdkl5Q3UTQ8 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cdkl5Q3UTQ8 Gm15378-201ENSMUST00000121894 207 ntBASIC20.24■□□□□ 0.83
Cdkl5Q3UTQ8 Gm37292-201ENSMUST00000192062 758 ntBASIC20.24■□□□□ 0.83
Cdkl5Q3UTQ8 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC20.24■□□□□ 0.83
Cdkl5Q3UTQ8 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cdkl5Q3UTQ8 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cdkl5Q3UTQ8 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cdkl5Q3UTQ8 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Cdkl5Q3UTQ8 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Cdkl5Q3UTQ8 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
Cdkl5Q3UTQ8 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC20.23■□□□□ 0.83
Cdkl5Q3UTQ8 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC20.23■□□□□ 0.83
Cdkl5Q3UTQ8 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cdkl5Q3UTQ8 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cdkl5Q3UTQ8 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cdkl5Q3UTQ8 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC20.23■□□□□ 0.83
Cdkl5Q3UTQ8 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Cdkl5Q3UTQ8 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Cdkl5Q3UTQ8 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cdkl5Q3UTQ8 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cdkl5Q3UTQ8 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Cdkl5Q3UTQ8 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cdkl5Q3UTQ8 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Cdkl5Q3UTQ8 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cdkl5Q3UTQ8 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cdkl5Q3UTQ8 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cdkl5Q3UTQ8 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cdkl5Q3UTQ8 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC20.21■□□□□ 0.83
Cdkl5Q3UTQ8 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cdkl5Q3UTQ8 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Cdkl5Q3UTQ8 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Cdkl5Q3UTQ8 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC20.21■□□□□ 0.83
Cdkl5Q3UTQ8 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cdkl5Q3UTQ8 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cdkl5Q3UTQ8 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cdkl5Q3UTQ8 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cdkl5Q3UTQ8 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
Cdkl5Q3UTQ8 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cdkl5Q3UTQ8 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cdkl5Q3UTQ8 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Cdkl5Q3UTQ8 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cdkl5Q3UTQ8 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC20.2■□□□□ 0.83
Cdkl5Q3UTQ8 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Cdkl5Q3UTQ8 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC20.2■□□□□ 0.82
Cdkl5Q3UTQ8 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cdkl5Q3UTQ8 Gm43183-201ENSMUST00000200632 547 ntBASIC20.2■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms