Protein–RNA interactions for Protein: Q3UTB7

Foxr1, Forkhead box protein R1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxr1Q3UTB7 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Foxr1Q3UTB7 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Foxr1Q3UTB7 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Foxr1Q3UTB7 Gm10013-201ENSMUST00000106074 672 ntBASIC17.8■□□□□ 0.44
Foxr1Q3UTB7 Gm17661-201ENSMUST00000170317 270 ntBASIC17.8■□□□□ 0.44
Foxr1Q3UTB7 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Foxr1Q3UTB7 Gm4217-201ENSMUST00000182243 1002 ntBASIC17.8■□□□□ 0.44
Foxr1Q3UTB7 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC17.8■□□□□ 0.44
Foxr1Q3UTB7 AC134329.2-201ENSMUST00000217897 428 ntBASIC17.8■□□□□ 0.44
Foxr1Q3UTB7 Gm18032-201ENSMUST00000222541 538 ntBASIC17.8■□□□□ 0.44
Foxr1Q3UTB7 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Foxr1Q3UTB7 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Foxr1Q3UTB7 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Foxr1Q3UTB7 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Foxr1Q3UTB7 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Foxr1Q3UTB7 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Foxr1Q3UTB7 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Foxr1Q3UTB7 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Foxr1Q3UTB7 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Foxr1Q3UTB7 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Foxr1Q3UTB7 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Foxr1Q3UTB7 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Foxr1Q3UTB7 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Foxr1Q3UTB7 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Foxr1Q3UTB7 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Foxr1Q3UTB7 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Foxr1Q3UTB7 AC120002.2-201ENSMUST00000220205 773 ntBASIC17.79■□□□□ 0.44
Foxr1Q3UTB7 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Foxr1Q3UTB7 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Foxr1Q3UTB7 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Foxr1Q3UTB7 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Foxr1Q3UTB7 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Foxr1Q3UTB7 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Foxr1Q3UTB7 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Foxr1Q3UTB7 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Foxr1Q3UTB7 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Foxr1Q3UTB7 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Foxr1Q3UTB7 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Foxr1Q3UTB7 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Foxr1Q3UTB7 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Foxr1Q3UTB7 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Foxr1Q3UTB7 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Foxr1Q3UTB7 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC17.78■□□□□ 0.44
Foxr1Q3UTB7 Gm6659-201ENSMUST00000174752 547 ntBASIC17.78■□□□□ 0.44
Foxr1Q3UTB7 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC17.78■□□□□ 0.44
Foxr1Q3UTB7 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC17.78■□□□□ 0.44
Foxr1Q3UTB7 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Foxr1Q3UTB7 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Foxr1Q3UTB7 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Foxr1Q3UTB7 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Foxr1Q3UTB7 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Foxr1Q3UTB7 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.44
Foxr1Q3UTB7 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC17.77■□□□□ 0.44
Foxr1Q3UTB7 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC17.77■□□□□ 0.44
Foxr1Q3UTB7 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC17.77■□□□□ 0.44
Foxr1Q3UTB7 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
Foxr1Q3UTB7 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC17.77■□□□□ 0.44
Foxr1Q3UTB7 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Foxr1Q3UTB7 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC17.77■□□□□ 0.43
Foxr1Q3UTB7 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Foxr1Q3UTB7 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Foxr1Q3UTB7 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Foxr1Q3UTB7 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Foxr1Q3UTB7 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Foxr1Q3UTB7 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Foxr1Q3UTB7 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Foxr1Q3UTB7 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Foxr1Q3UTB7 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Foxr1Q3UTB7 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Foxr1Q3UTB7 Gm18101-201ENSMUST00000215769 548 ntBASIC17.76■□□□□ 0.43
Foxr1Q3UTB7 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Foxr1Q3UTB7 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Foxr1Q3UTB7 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Foxr1Q3UTB7 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Foxr1Q3UTB7 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Foxr1Q3UTB7 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Foxr1Q3UTB7 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Foxr1Q3UTB7 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Foxr1Q3UTB7 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Foxr1Q3UTB7 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Foxr1Q3UTB7 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Foxr1Q3UTB7 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Foxr1Q3UTB7 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Foxr1Q3UTB7 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Foxr1Q3UTB7 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Foxr1Q3UTB7 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Foxr1Q3UTB7 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Foxr1Q3UTB7 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Foxr1Q3UTB7 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Foxr1Q3UTB7 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Foxr1Q3UTB7 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
Foxr1Q3UTB7 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Foxr1Q3UTB7 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Foxr1Q3UTB7 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Foxr1Q3UTB7 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Foxr1Q3UTB7 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Foxr1Q3UTB7 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Foxr1Q3UTB7 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Foxr1Q3UTB7 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Foxr1Q3UTB7 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms