Protein–RNA interactions for Protein: Q3USH5

Sfswap, Splicing factor, suppressor of white-apricot homolog, mousemouse

Known RBP Predictions only

Length 945 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SfswapQ3USH5 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
SfswapQ3USH5 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SfswapQ3USH5 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
SfswapQ3USH5 Idnk-204ENSMUST00000226010 1898 ntBASIC20.84■□□□□ 0.93
SfswapQ3USH5 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SfswapQ3USH5 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SfswapQ3USH5 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SfswapQ3USH5 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC20.83■□□□□ 0.93
SfswapQ3USH5 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
SfswapQ3USH5 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
SfswapQ3USH5 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SfswapQ3USH5 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
SfswapQ3USH5 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
SfswapQ3USH5 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
SfswapQ3USH5 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SfswapQ3USH5 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SfswapQ3USH5 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SfswapQ3USH5 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
SfswapQ3USH5 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
SfswapQ3USH5 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SfswapQ3USH5 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
SfswapQ3USH5 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
SfswapQ3USH5 Gm6659-201ENSMUST00000174752 547 ntBASIC20.82■□□□□ 0.92
SfswapQ3USH5 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SfswapQ3USH5 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SfswapQ3USH5 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
SfswapQ3USH5 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
SfswapQ3USH5 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
SfswapQ3USH5 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SfswapQ3USH5 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC20.82■□□□□ 0.92
SfswapQ3USH5 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SfswapQ3USH5 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SfswapQ3USH5 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
SfswapQ3USH5 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SfswapQ3USH5 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SfswapQ3USH5 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SfswapQ3USH5 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
SfswapQ3USH5 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SfswapQ3USH5 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SfswapQ3USH5 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC20.81■□□□□ 0.92
SfswapQ3USH5 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SfswapQ3USH5 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
SfswapQ3USH5 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
SfswapQ3USH5 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SfswapQ3USH5 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SfswapQ3USH5 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SfswapQ3USH5 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SfswapQ3USH5 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SfswapQ3USH5 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
SfswapQ3USH5 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
SfswapQ3USH5 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SfswapQ3USH5 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SfswapQ3USH5 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SfswapQ3USH5 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SfswapQ3USH5 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
SfswapQ3USH5 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SfswapQ3USH5 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SfswapQ3USH5 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SfswapQ3USH5 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC20.79■□□□□ 0.92
SfswapQ3USH5 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SfswapQ3USH5 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC20.79■□□□□ 0.92
SfswapQ3USH5 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC20.79■□□□□ 0.92
SfswapQ3USH5 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC20.79■□□□□ 0.92
SfswapQ3USH5 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SfswapQ3USH5 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
SfswapQ3USH5 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SfswapQ3USH5 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
SfswapQ3USH5 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SfswapQ3USH5 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC20.79■□□□□ 0.92
SfswapQ3USH5 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SfswapQ3USH5 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SfswapQ3USH5 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SfswapQ3USH5 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
SfswapQ3USH5 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC20.79■□□□□ 0.92
SfswapQ3USH5 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SfswapQ3USH5 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SfswapQ3USH5 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SfswapQ3USH5 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC20.78■□□□□ 0.92
SfswapQ3USH5 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SfswapQ3USH5 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC20.78■□□□□ 0.92
SfswapQ3USH5 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SfswapQ3USH5 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC20.78■□□□□ 0.92
SfswapQ3USH5 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC20.78■□□□□ 0.92
SfswapQ3USH5 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SfswapQ3USH5 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SfswapQ3USH5 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC20.78■□□□□ 0.92
SfswapQ3USH5 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
SfswapQ3USH5 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SfswapQ3USH5 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SfswapQ3USH5 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
SfswapQ3USH5 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SfswapQ3USH5 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
SfswapQ3USH5 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SfswapQ3USH5 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SfswapQ3USH5 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SfswapQ3USH5 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC20.77■□□□□ 0.92
SfswapQ3USH5 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC20.77■□□□□ 0.92
SfswapQ3USH5 Gm18032-201ENSMUST00000222541 538 ntBASIC20.77■□□□□ 0.92
SfswapQ3USH5 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SfswapQ3USH5 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms