Protein–RNA interactions for Protein: Q3UP24

Nlrc4, NLR family CARD domain-containing protein 4, mousemouse

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nlrc4Q3UP24 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Nlrc4Q3UP24 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
Nlrc4Q3UP24 Gm3375-201ENSMUST00000203929 796 ntBASIC18.4■□□□□ 0.54
Nlrc4Q3UP24 Odf3b-204ENSMUST00000227834 930 ntBASIC18.4■□□□□ 0.54
Nlrc4Q3UP24 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Nlrc4Q3UP24 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Nlrc4Q3UP24 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.4■□□□□ 0.54
Nlrc4Q3UP24 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nlrc4Q3UP24 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC18.4■□□□□ 0.54
Nlrc4Q3UP24 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Nlrc4Q3UP24 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nlrc4Q3UP24 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nlrc4Q3UP24 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nlrc4Q3UP24 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nlrc4Q3UP24 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC18.39■□□□□ 0.53
Nlrc4Q3UP24 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Nlrc4Q3UP24 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nlrc4Q3UP24 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Nlrc4Q3UP24 Gm37194-201ENSMUST00000193092 3031 ntBASIC18.39■□□□□ 0.53
Nlrc4Q3UP24 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nlrc4Q3UP24 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Nlrc4Q3UP24 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nlrc4Q3UP24 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nlrc4Q3UP24 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nlrc4Q3UP24 Fcho2-208ENSMUST00000224992 2964 ntBASIC18.39■□□□□ 0.53
Nlrc4Q3UP24 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Nlrc4Q3UP24 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nlrc4Q3UP24 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Nlrc4Q3UP24 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Nlrc4Q3UP24 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC18.38■□□□□ 0.53
Nlrc4Q3UP24 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Nlrc4Q3UP24 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nlrc4Q3UP24 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nlrc4Q3UP24 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC18.38■□□□□ 0.53
Nlrc4Q3UP24 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nlrc4Q3UP24 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC18.38■□□□□ 0.53
Nlrc4Q3UP24 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nlrc4Q3UP24 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nlrc4Q3UP24 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nlrc4Q3UP24 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nlrc4Q3UP24 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nlrc4Q3UP24 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nlrc4Q3UP24 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nlrc4Q3UP24 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nlrc4Q3UP24 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Nlrc4Q3UP24 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC18.37■□□□□ 0.53
Nlrc4Q3UP24 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC18.37■□□□□ 0.53
Nlrc4Q3UP24 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC18.37■□□□□ 0.53
Nlrc4Q3UP24 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Nlrc4Q3UP24 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Nlrc4Q3UP24 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nlrc4Q3UP24 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Nlrc4Q3UP24 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nlrc4Q3UP24 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC18.37■□□□□ 0.53
Nlrc4Q3UP24 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nlrc4Q3UP24 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nlrc4Q3UP24 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
Nlrc4Q3UP24 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nlrc4Q3UP24 Mir6982-201ENSMUST00000184354 68 ntBASIC18.36■□□□□ 0.53
Nlrc4Q3UP24 Gm38027-201ENSMUST00000192315 235 ntBASIC18.36■□□□□ 0.53
Nlrc4Q3UP24 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC18.36■□□□□ 0.53
Nlrc4Q3UP24 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Nlrc4Q3UP24 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC18.36■□□□□ 0.53
Nlrc4Q3UP24 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nlrc4Q3UP24 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nlrc4Q3UP24 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nlrc4Q3UP24 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nlrc4Q3UP24 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nlrc4Q3UP24 Gm5417-201ENSMUST00000079706 384 ntBASIC18.36■□□□□ 0.53
Nlrc4Q3UP24 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Nlrc4Q3UP24 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC18.35■□□□□ 0.53
Nlrc4Q3UP24 Gm19439-201ENSMUST00000198195 2273 ntBASIC18.35■□□□□ 0.53
Nlrc4Q3UP24 AC125311.2-201ENSMUST00000227477 1940 ntBASIC18.35■□□□□ 0.53
Nlrc4Q3UP24 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Nlrc4Q3UP24 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nlrc4Q3UP24 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nlrc4Q3UP24 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nlrc4Q3UP24 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Nlrc4Q3UP24 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
Nlrc4Q3UP24 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC18.35■□□□□ 0.53
Nlrc4Q3UP24 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nlrc4Q3UP24 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nlrc4Q3UP24 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nlrc4Q3UP24 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Nlrc4Q3UP24 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC18.35■□□□□ 0.53
Nlrc4Q3UP24 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nlrc4Q3UP24 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nlrc4Q3UP24 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nlrc4Q3UP24 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nlrc4Q3UP24 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC18.34■□□□□ 0.53
Nlrc4Q3UP24 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC18.34■□□□□ 0.53
Nlrc4Q3UP24 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nlrc4Q3UP24 Gm20472-201ENSMUST00000174403 1240 ntBASIC18.34■□□□□ 0.53
Nlrc4Q3UP24 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC18.34■□□□□ 0.53
Nlrc4Q3UP24 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nlrc4Q3UP24 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Nlrc4Q3UP24 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Nlrc4Q3UP24 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nlrc4Q3UP24 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Nlrc4Q3UP24 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms