Protein–RNA interactions for Protein: Q3UMQ8

Naf1, H/ACA ribonucleoprotein complex non-core subunit NAF1, mousemouse

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Naf1Q3UMQ8 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Naf1Q3UMQ8 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Naf1Q3UMQ8 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.76■□□□□ 0.43
Naf1Q3UMQ8 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Naf1Q3UMQ8 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Naf1Q3UMQ8 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Naf1Q3UMQ8 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Naf1Q3UMQ8 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Naf1Q3UMQ8 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Naf1Q3UMQ8 Fam105a-203ENSMUST00000226170 3043 ntBASIC17.76■□□□□ 0.43
Naf1Q3UMQ8 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Naf1Q3UMQ8 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Naf1Q3UMQ8 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Naf1Q3UMQ8 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Naf1Q3UMQ8 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
Naf1Q3UMQ8 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Naf1Q3UMQ8 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Naf1Q3UMQ8 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Naf1Q3UMQ8 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Naf1Q3UMQ8 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Naf1Q3UMQ8 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Naf1Q3UMQ8 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Naf1Q3UMQ8 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Naf1Q3UMQ8 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Naf1Q3UMQ8 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Naf1Q3UMQ8 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC17.75■□□□□ 0.43
Naf1Q3UMQ8 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Naf1Q3UMQ8 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Naf1Q3UMQ8 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Naf1Q3UMQ8 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Naf1Q3UMQ8 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Naf1Q3UMQ8 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Naf1Q3UMQ8 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Naf1Q3UMQ8 Idnk-204ENSMUST00000226010 1898 ntBASIC17.75■□□□□ 0.43
Naf1Q3UMQ8 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Naf1Q3UMQ8 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Naf1Q3UMQ8 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Naf1Q3UMQ8 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Naf1Q3UMQ8 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Naf1Q3UMQ8 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Naf1Q3UMQ8 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC17.74■□□□□ 0.43
Naf1Q3UMQ8 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC17.74■□□□□ 0.43
Naf1Q3UMQ8 Gm27463-201ENSMUST00000183569 57 ntBASIC17.74■□□□□ 0.43
Naf1Q3UMQ8 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
Naf1Q3UMQ8 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Naf1Q3UMQ8 AC130671.1-201ENSMUST00000227384 1237 ntBASIC17.74■□□□□ 0.43
Naf1Q3UMQ8 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Naf1Q3UMQ8 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Naf1Q3UMQ8 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Naf1Q3UMQ8 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
Naf1Q3UMQ8 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Naf1Q3UMQ8 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Naf1Q3UMQ8 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Naf1Q3UMQ8 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Naf1Q3UMQ8 Gm45141-201ENSMUST00000206502 1888 ntBASIC17.73■□□□□ 0.43
Naf1Q3UMQ8 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Naf1Q3UMQ8 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Naf1Q3UMQ8 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Naf1Q3UMQ8 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Naf1Q3UMQ8 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Naf1Q3UMQ8 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Naf1Q3UMQ8 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Naf1Q3UMQ8 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC17.73■□□□□ 0.43
Naf1Q3UMQ8 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
Naf1Q3UMQ8 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Naf1Q3UMQ8 Gm4217-201ENSMUST00000182243 1002 ntBASIC17.73■□□□□ 0.43
Naf1Q3UMQ8 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Naf1Q3UMQ8 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Naf1Q3UMQ8 AC159205.6-201ENSMUST00000224935 887 ntBASIC17.73■□□□□ 0.43
Naf1Q3UMQ8 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
Naf1Q3UMQ8 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Naf1Q3UMQ8 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Naf1Q3UMQ8 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Naf1Q3UMQ8 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Naf1Q3UMQ8 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Naf1Q3UMQ8 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Naf1Q3UMQ8 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Naf1Q3UMQ8 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Naf1Q3UMQ8 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Naf1Q3UMQ8 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Naf1Q3UMQ8 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
Naf1Q3UMQ8 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Naf1Q3UMQ8 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Naf1Q3UMQ8 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Naf1Q3UMQ8 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Naf1Q3UMQ8 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Naf1Q3UMQ8 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Naf1Q3UMQ8 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Naf1Q3UMQ8 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Naf1Q3UMQ8 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Naf1Q3UMQ8 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Naf1Q3UMQ8 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC17.71■□□□□ 0.43
Naf1Q3UMQ8 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Naf1Q3UMQ8 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
Naf1Q3UMQ8 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Naf1Q3UMQ8 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Naf1Q3UMQ8 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC17.71■□□□□ 0.43
Naf1Q3UMQ8 Gm43548-201ENSMUST00000197139 2353 ntBASIC17.71■□□□□ 0.43
Naf1Q3UMQ8 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Naf1Q3UMQ8 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 14.2 ms