Protein–RNA interactions for Protein: Q3UHK8

Tnrc6a, Trinucleotide repeat-containing gene 6A protein, mousemouse

Known RBP Predictions only

Length 1,896 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnrc6aQ3UHK8 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC16.2■□□□□ 0.18
Tnrc6aQ3UHK8 Gm28033-201ENSMUST00000184224 96 ntBASIC16.2■□□□□ 0.18
Tnrc6aQ3UHK8 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Tnrc6aQ3UHK8 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Tnrc6aQ3UHK8 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Tnrc6aQ3UHK8 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Tnrc6aQ3UHK8 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Tnrc6aQ3UHK8 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Tnrc6aQ3UHK8 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Tnrc6aQ3UHK8 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Tnrc6aQ3UHK8 Gm44832-201ENSMUST00000208849 2303 ntBASIC16.2■□□□□ 0.18
Tnrc6aQ3UHK8 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
Tnrc6aQ3UHK8 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Tnrc6aQ3UHK8 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Tnrc6aQ3UHK8 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Tnrc6aQ3UHK8 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Tnrc6aQ3UHK8 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Tnrc6aQ3UHK8 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Tnrc6aQ3UHK8 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Tnrc6aQ3UHK8 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tnrc6aQ3UHK8 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tnrc6aQ3UHK8 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Tnrc6aQ3UHK8 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC16.19■□□□□ 0.18
Tnrc6aQ3UHK8 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tnrc6aQ3UHK8 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC16.19■□□□□ 0.18
Tnrc6aQ3UHK8 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC16.19■□□□□ 0.18
Tnrc6aQ3UHK8 Gm25016-201ENSMUST00000158399 131 ntBASIC16.19■□□□□ 0.18
Tnrc6aQ3UHK8 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Tnrc6aQ3UHK8 Gm29518-201ENSMUST00000190858 372 ntBASIC16.19■□□□□ 0.18
Tnrc6aQ3UHK8 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC16.19■□□□□ 0.18
Tnrc6aQ3UHK8 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tnrc6aQ3UHK8 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Tnrc6aQ3UHK8 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC16.19■□□□□ 0.18
Tnrc6aQ3UHK8 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tnrc6aQ3UHK8 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
Tnrc6aQ3UHK8 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tnrc6aQ3UHK8 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Tnrc6aQ3UHK8 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC16.18■□□□□ 0.18
Tnrc6aQ3UHK8 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Tnrc6aQ3UHK8 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tnrc6aQ3UHK8 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Tnrc6aQ3UHK8 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tnrc6aQ3UHK8 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tnrc6aQ3UHK8 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tnrc6aQ3UHK8 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tnrc6aQ3UHK8 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tnrc6aQ3UHK8 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tnrc6aQ3UHK8 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Tnrc6aQ3UHK8 Gm18958-201ENSMUST00000174258 762 ntBASIC16.18■□□□□ 0.18
Tnrc6aQ3UHK8 Gm17807-201ENSMUST00000186869 298 ntBASIC16.18■□□□□ 0.18
Tnrc6aQ3UHK8 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Tnrc6aQ3UHK8 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tnrc6aQ3UHK8 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tnrc6aQ3UHK8 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tnrc6aQ3UHK8 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tnrc6aQ3UHK8 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tnrc6aQ3UHK8 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tnrc6aQ3UHK8 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Tnrc6aQ3UHK8 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tnrc6aQ3UHK8 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tnrc6aQ3UHK8 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tnrc6aQ3UHK8 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tnrc6aQ3UHK8 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Tnrc6aQ3UHK8 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tnrc6aQ3UHK8 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Tnrc6aQ3UHK8 Fam105a-203ENSMUST00000226170 3043 ntBASIC16.17■□□□□ 0.18
Tnrc6aQ3UHK8 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
Tnrc6aQ3UHK8 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Tnrc6aQ3UHK8 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Tnrc6aQ3UHK8 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tnrc6aQ3UHK8 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tnrc6aQ3UHK8 Idnk-204ENSMUST00000226010 1898 ntBASIC16.17■□□□□ 0.18
Tnrc6aQ3UHK8 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Tnrc6aQ3UHK8 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tnrc6aQ3UHK8 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tnrc6aQ3UHK8 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Tnrc6aQ3UHK8 Gm27704-201ENSMUST00000185094 107 ntBASIC16.16■□□□□ 0.18
Tnrc6aQ3UHK8 Umpk-ps-201ENSMUST00000211897 827 ntBASIC16.16■□□□□ 0.18
Tnrc6aQ3UHK8 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tnrc6aQ3UHK8 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC16.16■□□□□ 0.18
Tnrc6aQ3UHK8 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tnrc6aQ3UHK8 Fst-202ENSMUST00000223640 2612 ntBASIC16.16■□□□□ 0.18
Tnrc6aQ3UHK8 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Tnrc6aQ3UHK8 Gm8258-201ENSMUST00000055593 1449 ntBASIC16.16■□□□□ 0.18
Tnrc6aQ3UHK8 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tnrc6aQ3UHK8 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tnrc6aQ3UHK8 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tnrc6aQ3UHK8 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Tnrc6aQ3UHK8 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tnrc6aQ3UHK8 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Tnrc6aQ3UHK8 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC16.16■□□□□ 0.18
Tnrc6aQ3UHK8 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Tnrc6aQ3UHK8 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tnrc6aQ3UHK8 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Tnrc6aQ3UHK8 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tnrc6aQ3UHK8 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tnrc6aQ3UHK8 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Tnrc6aQ3UHK8 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tnrc6aQ3UHK8 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tnrc6aQ3UHK8 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms