Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Spg11Q3UHA3 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Spg11Q3UHA3 Cmtm5-203ENSMUST00000227441 610 ntBASIC16.15■□□□□ 0.18
Spg11Q3UHA3 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Spg11Q3UHA3 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Spg11Q3UHA3 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Spg11Q3UHA3 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Spg11Q3UHA3 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Spg11Q3UHA3 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Spg11Q3UHA3 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Spg11Q3UHA3 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Spg11Q3UHA3 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC16.15■□□□□ 0.18
Spg11Q3UHA3 Gm37025-201ENSMUST00000195159 829 ntBASIC16.15■□□□□ 0.18
Spg11Q3UHA3 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Spg11Q3UHA3 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
Spg11Q3UHA3 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.18
Spg11Q3UHA3 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Spg11Q3UHA3 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Spg11Q3UHA3 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Spg11Q3UHA3 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Spg11Q3UHA3 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC16.14■□□□□ 0.17
Spg11Q3UHA3 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Spg11Q3UHA3 H2af-ps-201ENSMUST00000119066 295 ntBASIC16.14■□□□□ 0.17
Spg11Q3UHA3 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Spg11Q3UHA3 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Spg11Q3UHA3 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Spg11Q3UHA3 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Spg11Q3UHA3 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Spg11Q3UHA3 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Spg11Q3UHA3 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Spg11Q3UHA3 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Spg11Q3UHA3 AC154222.1-201ENSMUST00000223882 475 ntBASIC16.14■□□□□ 0.17
Spg11Q3UHA3 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Spg11Q3UHA3 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Spg11Q3UHA3 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Spg11Q3UHA3 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC16.14■□□□□ 0.17
Spg11Q3UHA3 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Spg11Q3UHA3 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Spg11Q3UHA3 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Spg11Q3UHA3 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Spg11Q3UHA3 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Spg11Q3UHA3 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Spg11Q3UHA3 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Spg11Q3UHA3 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC16.13■□□□□ 0.17
Spg11Q3UHA3 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC16.13■□□□□ 0.17
Spg11Q3UHA3 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Spg11Q3UHA3 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Spg11Q3UHA3 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Spg11Q3UHA3 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Spg11Q3UHA3 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Spg11Q3UHA3 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC16.13■□□□□ 0.17
Spg11Q3UHA3 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC16.13■□□□□ 0.17
Spg11Q3UHA3 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Spg11Q3UHA3 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Spg11Q3UHA3 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Spg11Q3UHA3 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Spg11Q3UHA3 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Spg11Q3UHA3 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Spg11Q3UHA3 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Spg11Q3UHA3 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Spg11Q3UHA3 Gm45683-201ENSMUST00000210825 1247 ntBASIC16.12■□□□□ 0.17
Spg11Q3UHA3 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC16.12■□□□□ 0.17
Spg11Q3UHA3 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC16.12■□□□□ 0.17
Spg11Q3UHA3 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Spg11Q3UHA3 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Spg11Q3UHA3 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Spg11Q3UHA3 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Spg11Q3UHA3 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Spg11Q3UHA3 Gm43767-201ENSMUST00000198933 381 ntBASIC16.11■□□□□ 0.17
Spg11Q3UHA3 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC16.11■□□□□ 0.17
Spg11Q3UHA3 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Spg11Q3UHA3 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Spg11Q3UHA3 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Spg11Q3UHA3 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Spg11Q3UHA3 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Spg11Q3UHA3 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Spg11Q3UHA3 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Spg11Q3UHA3 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Spg11Q3UHA3 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Spg11Q3UHA3 AC153794.1-201ENSMUST00000169148 126 ntBASIC16.11■□□□□ 0.17
Spg11Q3UHA3 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Spg11Q3UHA3 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC16.11■□□□□ 0.17
Spg11Q3UHA3 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Spg11Q3UHA3 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Spg11Q3UHA3 Gm38345-201ENSMUST00000192635 1748 ntBASIC16.11■□□□□ 0.17
Spg11Q3UHA3 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Spg11Q3UHA3 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC16.11■□□□□ 0.17
Spg11Q3UHA3 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Spg11Q3UHA3 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Spg11Q3UHA3 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Spg11Q3UHA3 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Spg11Q3UHA3 AC122901.1-201ENSMUST00000214203 1790 ntBASIC16.1■□□□□ 0.17
Spg11Q3UHA3 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Spg11Q3UHA3 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Spg11Q3UHA3 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Spg11Q3UHA3 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Spg11Q3UHA3 Gm14701-201ENSMUST00000117156 348 ntBASIC16.1■□□□□ 0.17
Spg11Q3UHA3 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC16.1■□□□□ 0.17
Spg11Q3UHA3 Gm27000-201ENSMUST00000182943 842 ntBASIC16.1■□□□□ 0.17
Spg11Q3UHA3 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms