Protein–RNA interactions for Protein: Q3U2A8

Vars2, Valine--tRNA ligase, mitochondrial, mousemouse

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vars2Q3U2A8 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Vars2Q3U2A8 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Vars2Q3U2A8 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Vars2Q3U2A8 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC21.77■■□□□ 1.08
Vars2Q3U2A8 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC21.77■■□□□ 1.08
Vars2Q3U2A8 Gm11336-201ENSMUST00000118168 334 ntBASIC21.77■■□□□ 1.08
Vars2Q3U2A8 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC21.77■■□□□ 1.08
Vars2Q3U2A8 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Vars2Q3U2A8 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Vars2Q3U2A8 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Vars2Q3U2A8 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
Vars2Q3U2A8 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.07
Vars2Q3U2A8 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Vars2Q3U2A8 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Vars2Q3U2A8 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Vars2Q3U2A8 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
Vars2Q3U2A8 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Vars2Q3U2A8 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
Vars2Q3U2A8 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC21.76■■□□□ 1.07
Vars2Q3U2A8 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Vars2Q3U2A8 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC21.76■■□□□ 1.07
Vars2Q3U2A8 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Vars2Q3U2A8 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Vars2Q3U2A8 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Vars2Q3U2A8 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Vars2Q3U2A8 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Vars2Q3U2A8 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Vars2Q3U2A8 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Vars2Q3U2A8 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Vars2Q3U2A8 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Vars2Q3U2A8 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Vars2Q3U2A8 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Vars2Q3U2A8 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Vars2Q3U2A8 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC21.74■■□□□ 1.07
Vars2Q3U2A8 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC21.74■■□□□ 1.07
Vars2Q3U2A8 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Vars2Q3U2A8 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Vars2Q3U2A8 Gm10060-201ENSMUST00000212002 111 ntBASIC21.74■■□□□ 1.07
Vars2Q3U2A8 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Vars2Q3U2A8 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Vars2Q3U2A8 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Vars2Q3U2A8 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Vars2Q3U2A8 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Vars2Q3U2A8 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Vars2Q3U2A8 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Vars2Q3U2A8 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Vars2Q3U2A8 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Vars2Q3U2A8 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
Vars2Q3U2A8 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC21.73■■□□□ 1.07
Vars2Q3U2A8 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Vars2Q3U2A8 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC21.73■■□□□ 1.07
Vars2Q3U2A8 AC160338.1-201ENSMUST00000214232 705 ntBASIC21.73■■□□□ 1.07
Vars2Q3U2A8 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Vars2Q3U2A8 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Vars2Q3U2A8 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Vars2Q3U2A8 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Vars2Q3U2A8 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Vars2Q3U2A8 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Vars2Q3U2A8 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Vars2Q3U2A8 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Vars2Q3U2A8 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Vars2Q3U2A8 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC21.72■■□□□ 1.07
Vars2Q3U2A8 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Vars2Q3U2A8 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC21.72■■□□□ 1.07
Vars2Q3U2A8 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
Vars2Q3U2A8 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC21.72■■□□□ 1.07
Vars2Q3U2A8 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
Vars2Q3U2A8 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Vars2Q3U2A8 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC21.72■■□□□ 1.07
Vars2Q3U2A8 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC21.72■■□□□ 1.07
Vars2Q3U2A8 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Vars2Q3U2A8 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Vars2Q3U2A8 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Vars2Q3U2A8 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Vars2Q3U2A8 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Vars2Q3U2A8 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Vars2Q3U2A8 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Vars2Q3U2A8 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Vars2Q3U2A8 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC21.72■■□□□ 1.07
Vars2Q3U2A8 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Vars2Q3U2A8 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Vars2Q3U2A8 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Vars2Q3U2A8 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
Vars2Q3U2A8 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Vars2Q3U2A8 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Vars2Q3U2A8 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC21.71■■□□□ 1.07
Vars2Q3U2A8 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Vars2Q3U2A8 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Vars2Q3U2A8 Gm44357-201ENSMUST00000195897 142 ntBASIC21.71■■□□□ 1.07
Vars2Q3U2A8 Gm19658-201ENSMUST00000196231 138 ntBASIC21.71■■□□□ 1.07
Vars2Q3U2A8 Gm44367-201ENSMUST00000196836 138 ntBASIC21.71■■□□□ 1.07
Vars2Q3U2A8 Gm44350-201ENSMUST00000197197 138 ntBASIC21.71■■□□□ 1.07
Vars2Q3U2A8 Gm44390-201ENSMUST00000197533 144 ntBASIC21.71■■□□□ 1.07
Vars2Q3U2A8 Gm44313-201ENSMUST00000198018 138 ntBASIC21.71■■□□□ 1.07
Vars2Q3U2A8 Gm44486-201ENSMUST00000198508 138 ntBASIC21.71■■□□□ 1.07
Vars2Q3U2A8 Gm44454-201ENSMUST00000198541 138 ntBASIC21.71■■□□□ 1.07
Vars2Q3U2A8 Gm44314-201ENSMUST00000199263 138 ntBASIC21.71■■□□□ 1.07
Vars2Q3U2A8 Gm44394-201ENSMUST00000199558 138 ntBASIC21.71■■□□□ 1.07
Vars2Q3U2A8 Gm44484-201ENSMUST00000199873 138 ntBASIC21.71■■□□□ 1.07
Vars2Q3U2A8 Gm44466-201ENSMUST00000200264 138 ntBASIC21.71■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms