Protein–RNA interactions for Protein: Q3SXB8

Colec11, Collectin-11, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Colec11Q3SXB8 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC17.73■□□□□ 0.43
Colec11Q3SXB8 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC17.73■□□□□ 0.43
Colec11Q3SXB8 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Colec11Q3SXB8 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Colec11Q3SXB8 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Colec11Q3SXB8 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Colec11Q3SXB8 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Colec11Q3SXB8 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Colec11Q3SXB8 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Colec11Q3SXB8 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Colec11Q3SXB8 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Colec11Q3SXB8 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Colec11Q3SXB8 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Colec11Q3SXB8 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Colec11Q3SXB8 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Colec11Q3SXB8 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Colec11Q3SXB8 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Colec11Q3SXB8 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Colec11Q3SXB8 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Colec11Q3SXB8 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Colec11Q3SXB8 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC17.71■□□□□ 0.43
Colec11Q3SXB8 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Colec11Q3SXB8 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Colec11Q3SXB8 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Colec11Q3SXB8 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Colec11Q3SXB8 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Colec11Q3SXB8 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Colec11Q3SXB8 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Colec11Q3SXB8 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC17.71■□□□□ 0.43
Colec11Q3SXB8 Gm37055-201ENSMUST00000191866 133 ntBASIC17.71■□□□□ 0.43
Colec11Q3SXB8 Gm8969-201ENSMUST00000199694 526 ntBASIC17.71■□□□□ 0.43
Colec11Q3SXB8 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Colec11Q3SXB8 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Colec11Q3SXB8 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Colec11Q3SXB8 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Colec11Q3SXB8 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Colec11Q3SXB8 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Colec11Q3SXB8 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
Colec11Q3SXB8 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Colec11Q3SXB8 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Colec11Q3SXB8 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Colec11Q3SXB8 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Colec11Q3SXB8 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Colec11Q3SXB8 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC17.7■□□□□ 0.42
Colec11Q3SXB8 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Colec11Q3SXB8 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Colec11Q3SXB8 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Colec11Q3SXB8 Mir5122-201ENSMUST00000175004 89 ntBASIC17.7■□□□□ 0.42
Colec11Q3SXB8 Mir8112-201ENSMUST00000184382 131 ntBASIC17.7■□□□□ 0.42
Colec11Q3SXB8 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Colec11Q3SXB8 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC17.7■□□□□ 0.42
Colec11Q3SXB8 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC17.7■□□□□ 0.42
Colec11Q3SXB8 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Colec11Q3SXB8 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Colec11Q3SXB8 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Colec11Q3SXB8 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Colec11Q3SXB8 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Colec11Q3SXB8 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Colec11Q3SXB8 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Colec11Q3SXB8 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Colec11Q3SXB8 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC17.7■□□□□ 0.42
Colec11Q3SXB8 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Colec11Q3SXB8 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Colec11Q3SXB8 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Colec11Q3SXB8 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
Colec11Q3SXB8 Gm44832-201ENSMUST00000208849 2303 ntBASIC17.69■□□□□ 0.42
Colec11Q3SXB8 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Colec11Q3SXB8 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Colec11Q3SXB8 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
Colec11Q3SXB8 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Colec11Q3SXB8 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Colec11Q3SXB8 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Colec11Q3SXB8 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Colec11Q3SXB8 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Colec11Q3SXB8 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Colec11Q3SXB8 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Colec11Q3SXB8 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Colec11Q3SXB8 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Colec11Q3SXB8 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Colec11Q3SXB8 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Colec11Q3SXB8 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Colec11Q3SXB8 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Colec11Q3SXB8 Gm7712-202ENSMUST00000222331 1510 ntBASIC17.68■□□□□ 0.42
Colec11Q3SXB8 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Colec11Q3SXB8 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Colec11Q3SXB8 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Colec11Q3SXB8 Gm16042-201ENSMUST00000204813 1247 ntBASIC17.68■□□□□ 0.42
Colec11Q3SXB8 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Colec11Q3SXB8 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Colec11Q3SXB8 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.68■□□□□ 0.42
Colec11Q3SXB8 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Colec11Q3SXB8 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Colec11Q3SXB8 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Colec11Q3SXB8 Fcho2-208ENSMUST00000224992 2964 ntBASIC17.68■□□□□ 0.42
Colec11Q3SXB8 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Colec11Q3SXB8 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Colec11Q3SXB8 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Colec11Q3SXB8 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Colec11Q3SXB8 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
Colec11Q3SXB8 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms