Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Ush2AQ2QI47 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Ush2AQ2QI47 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
Ush2AQ2QI47 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Ush2AQ2QI47 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Ush2AQ2QI47 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Ush2AQ2QI47 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC9.4□□□□□ -0.91
Ush2AQ2QI47 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC9.4□□□□□ -0.91
Ush2AQ2QI47 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Ush2AQ2QI47 Gm7230-201ENSMUST00000173026 815 ntBASIC9.39□□□□□ -0.91
Ush2AQ2QI47 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC9.39□□□□□ -0.91
Ush2AQ2QI47 AC130829.1-201ENSMUST00000221548 494 ntBASIC9.39□□□□□ -0.91
Ush2AQ2QI47 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ush2AQ2QI47 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ush2AQ2QI47 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ush2AQ2QI47 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ush2AQ2QI47 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Ush2AQ2QI47 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC9.39□□□□□ -0.91
Ush2AQ2QI47 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
Ush2AQ2QI47 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ush2AQ2QI47 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Ush2AQ2QI47 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ush2AQ2QI47 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Ush2AQ2QI47 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC9.39□□□□□ -0.91
Ush2AQ2QI47 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Ush2AQ2QI47 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC9.39□□□□□ -0.91
Ush2AQ2QI47 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ush2AQ2QI47 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ush2AQ2QI47 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ush2AQ2QI47 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ush2AQ2QI47 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ush2AQ2QI47 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
Ush2AQ2QI47 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ush2AQ2QI47 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC9.39□□□□□ -0.91
Ush2AQ2QI47 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC9.39□□□□□ -0.91
Ush2AQ2QI47 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ush2AQ2QI47 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC9.39□□□□□ -0.91
Ush2AQ2QI47 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ush2AQ2QI47 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Ush2AQ2QI47 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Ush2AQ2QI47 Gm11025-201ENSMUST00000140773 466 ntBASIC9.38□□□□□ -0.91
Ush2AQ2QI47 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Ush2AQ2QI47 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Ush2AQ2QI47 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Ush2AQ2QI47 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
Ush2AQ2QI47 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Ush2AQ2QI47 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Ush2AQ2QI47 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC9.38□□□□□ -0.91
Ush2AQ2QI47 Mir6977-201ENSMUST00000184960 64 ntBASIC9.38□□□□□ -0.91
Ush2AQ2QI47 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC9.38□□□□□ -0.91
Ush2AQ2QI47 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC9.38□□□□□ -0.91
Ush2AQ2QI47 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC9.38□□□□□ -0.91
Ush2AQ2QI47 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Ush2AQ2QI47 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
Ush2AQ2QI47 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC9.38□□□□□ -0.91
Ush2AQ2QI47 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Ush2AQ2QI47 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC9.38□□□□□ -0.91
Ush2AQ2QI47 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Ush2AQ2QI47 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Ush2AQ2QI47 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC9.38□□□□□ -0.91
Ush2AQ2QI47 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Ush2AQ2QI47 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Ush2AQ2QI47 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC9.38□□□□□ -0.91
Ush2AQ2QI47 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC9.38□□□□□ -0.91
Ush2AQ2QI47 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
Ush2AQ2QI47 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC9.38□□□□□ -0.91
Ush2AQ2QI47 Gm2423-201ENSMUST00000074863 733 ntBASIC9.38□□□□□ -0.91
Ush2AQ2QI47 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Ush2AQ2QI47 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC9.38□□□□□ -0.91
Ush2AQ2QI47 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Ush2AQ2QI47 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Ush2AQ2QI47 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Ush2AQ2QI47 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Ush2AQ2QI47 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC9.37□□□□□ -0.91
Ush2AQ2QI47 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC9.37□□□□□ -0.91
Ush2AQ2QI47 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Ush2AQ2QI47 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC9.37□□□□□ -0.91
Ush2AQ2QI47 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Ush2AQ2QI47 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Ush2AQ2QI47 Gm15590-201ENSMUST00000078419 552 ntBASIC9.37□□□□□ -0.91
Ush2AQ2QI47 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Ush2AQ2QI47 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
Ush2AQ2QI47 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Ush2AQ2QI47 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC9.37□□□□□ -0.91
Ush2AQ2QI47 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Ush2AQ2QI47 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC9.37□□□□□ -0.91
Ush2AQ2QI47 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Ush2AQ2QI47 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC9.37□□□□□ -0.91
Ush2AQ2QI47 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Ush2AQ2QI47 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Ush2AQ2QI47 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Ush2AQ2QI47 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC9.37□□□□□ -0.91
Ush2AQ2QI47 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
Ush2AQ2QI47 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Ush2AQ2QI47 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC9.37□□□□□ -0.91
Ush2AQ2QI47 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
Ush2AQ2QI47 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Ush2AQ2QI47 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Ush2AQ2QI47 Gm13036-201ENSMUST00000117799 748 ntBASIC9.37□□□□□ -0.91
Ush2AQ2QI47 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms