Protein–RNA interactions for Protein: Q2MKA5

Chrna5, Neuronal acetylcholine receptor subunit alpha-5, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna5Q2MKA5 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Chrna5Q2MKA5 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC20.81■□□□□ 0.92
Chrna5Q2MKA5 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Chrna5Q2MKA5 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC20.81■□□□□ 0.92
Chrna5Q2MKA5 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
Chrna5Q2MKA5 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Chrna5Q2MKA5 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Chrna5Q2MKA5 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Chrna5Q2MKA5 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Chrna5Q2MKA5 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Chrna5Q2MKA5 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC20.81■□□□□ 0.92
Chrna5Q2MKA5 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC20.81■□□□□ 0.92
Chrna5Q2MKA5 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Chrna5Q2MKA5 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Chrna5Q2MKA5 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Chrna5Q2MKA5 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Chrna5Q2MKA5 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Chrna5Q2MKA5 Gm43213-201ENSMUST00000151866 1790 ntBASIC20.8■□□□□ 0.92
Chrna5Q2MKA5 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Chrna5Q2MKA5 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Chrna5Q2MKA5 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Chrna5Q2MKA5 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Chrna5Q2MKA5 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC20.8■□□□□ 0.92
Chrna5Q2MKA5 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC20.8■□□□□ 0.92
Chrna5Q2MKA5 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC20.8■□□□□ 0.92
Chrna5Q2MKA5 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC20.8■□□□□ 0.92
Chrna5Q2MKA5 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
Chrna5Q2MKA5 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Chrna5Q2MKA5 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC20.8■□□□□ 0.92
Chrna5Q2MKA5 Gm45328-201ENSMUST00000210942 917 ntBASIC20.8■□□□□ 0.92
Chrna5Q2MKA5 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Chrna5Q2MKA5 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Chrna5Q2MKA5 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Chrna5Q2MKA5 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Chrna5Q2MKA5 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Chrna5Q2MKA5 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC20.8■□□□□ 0.92
Chrna5Q2MKA5 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Chrna5Q2MKA5 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Chrna5Q2MKA5 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Chrna5Q2MKA5 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Chrna5Q2MKA5 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Chrna5Q2MKA5 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Chrna5Q2MKA5 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Chrna5Q2MKA5 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC20.79■□□□□ 0.92
Chrna5Q2MKA5 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Chrna5Q2MKA5 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Chrna5Q2MKA5 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Chrna5Q2MKA5 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Chrna5Q2MKA5 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Chrna5Q2MKA5 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Chrna5Q2MKA5 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Chrna5Q2MKA5 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Chrna5Q2MKA5 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC20.78■□□□□ 0.92
Chrna5Q2MKA5 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Chrna5Q2MKA5 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Chrna5Q2MKA5 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC20.78■□□□□ 0.92
Chrna5Q2MKA5 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Chrna5Q2MKA5 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC20.78■□□□□ 0.92
Chrna5Q2MKA5 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Chrna5Q2MKA5 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Chrna5Q2MKA5 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Chrna5Q2MKA5 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Chrna5Q2MKA5 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Chrna5Q2MKA5 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Chrna5Q2MKA5 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC20.78■□□□□ 0.92
Chrna5Q2MKA5 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Chrna5Q2MKA5 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Chrna5Q2MKA5 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Chrna5Q2MKA5 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Chrna5Q2MKA5 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Chrna5Q2MKA5 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC20.77■□□□□ 0.92
Chrna5Q2MKA5 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Chrna5Q2MKA5 Gm15794-201ENSMUST00000120182 631 ntBASIC20.77■□□□□ 0.92
Chrna5Q2MKA5 Birc2-201ENSMUST00000054878 378 ntBASIC20.77■□□□□ 0.92
Chrna5Q2MKA5 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Chrna5Q2MKA5 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Chrna5Q2MKA5 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Chrna5Q2MKA5 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Chrna5Q2MKA5 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Chrna5Q2MKA5 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.91
Chrna5Q2MKA5 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Chrna5Q2MKA5 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Chrna5Q2MKA5 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Chrna5Q2MKA5 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Chrna5Q2MKA5 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Chrna5Q2MKA5 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Chrna5Q2MKA5 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC20.76■□□□□ 0.91
Chrna5Q2MKA5 AC164629.2-201ENSMUST00000217916 270 ntBASIC20.76■□□□□ 0.91
Chrna5Q2MKA5 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC20.76■□□□□ 0.91
Chrna5Q2MKA5 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
Chrna5Q2MKA5 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Chrna5Q2MKA5 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Chrna5Q2MKA5 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Chrna5Q2MKA5 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Chrna5Q2MKA5 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Chrna5Q2MKA5 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC20.76■□□□□ 0.91
Chrna5Q2MKA5 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Chrna5Q2MKA5 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Chrna5Q2MKA5 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Chrna5Q2MKA5 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms