Protein–RNA interactions for Protein: Q00422

Gabpa, GA-binding protein alpha chain, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GabpaQ00422 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
GabpaQ00422 Gm6728-201ENSMUST00000178117 1065 ntBASIC19.89■□□□□ 0.77
GabpaQ00422 Gm21362-201ENSMUST00000194272 928 ntBASIC19.89■□□□□ 0.77
GabpaQ00422 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
GabpaQ00422 Gm18101-201ENSMUST00000215769 548 ntBASIC19.89■□□□□ 0.77
GabpaQ00422 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
GabpaQ00422 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
GabpaQ00422 Iqck-206ENSMUST00000208658 2891 ntBASIC19.89■□□□□ 0.77
GabpaQ00422 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
GabpaQ00422 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
GabpaQ00422 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
GabpaQ00422 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
GabpaQ00422 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
GabpaQ00422 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
GabpaQ00422 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
GabpaQ00422 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
GabpaQ00422 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
GabpaQ00422 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
GabpaQ00422 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
GabpaQ00422 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
GabpaQ00422 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
GabpaQ00422 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC19.88■□□□□ 0.77
GabpaQ00422 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
GabpaQ00422 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
GabpaQ00422 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
GabpaQ00422 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
GabpaQ00422 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.87■□□□□ 0.77
GabpaQ00422 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
GabpaQ00422 AA414768-201ENSMUST00000121924 1257 ntBASIC19.87■□□□□ 0.77
GabpaQ00422 Gm13474-201ENSMUST00000122466 815 ntBASIC19.87■□□□□ 0.77
GabpaQ00422 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC19.87■□□□□ 0.77
GabpaQ00422 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
GabpaQ00422 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
GabpaQ00422 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
GabpaQ00422 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
GabpaQ00422 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
GabpaQ00422 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
GabpaQ00422 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
GabpaQ00422 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
GabpaQ00422 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
GabpaQ00422 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
GabpaQ00422 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
GabpaQ00422 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
GabpaQ00422 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
GabpaQ00422 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC19.86■□□□□ 0.77
GabpaQ00422 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
GabpaQ00422 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC19.86■□□□□ 0.77
GabpaQ00422 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
GabpaQ00422 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
GabpaQ00422 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
GabpaQ00422 Mir8112-201ENSMUST00000184382 131 ntBASIC19.86■□□□□ 0.77
GabpaQ00422 AC120002.2-201ENSMUST00000220205 773 ntBASIC19.86■□□□□ 0.77
GabpaQ00422 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
GabpaQ00422 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
GabpaQ00422 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC19.86■□□□□ 0.77
GabpaQ00422 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
GabpaQ00422 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
GabpaQ00422 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
GabpaQ00422 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
GabpaQ00422 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
GabpaQ00422 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
GabpaQ00422 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC19.85■□□□□ 0.77
GabpaQ00422 Gm17661-201ENSMUST00000170317 270 ntBASIC19.85■□□□□ 0.77
GabpaQ00422 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC19.85■□□□□ 0.77
GabpaQ00422 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
GabpaQ00422 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
GabpaQ00422 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
GabpaQ00422 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC19.85■□□□□ 0.77
GabpaQ00422 Dmtn-210ENSMUST00000228824 2377 ntBASIC19.85■□□□□ 0.77
GabpaQ00422 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
GabpaQ00422 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
GabpaQ00422 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
GabpaQ00422 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
GabpaQ00422 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
GabpaQ00422 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
GabpaQ00422 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
GabpaQ00422 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
GabpaQ00422 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
GabpaQ00422 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
GabpaQ00422 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
GabpaQ00422 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
GabpaQ00422 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
GabpaQ00422 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
GabpaQ00422 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC19.84■□□□□ 0.77
GabpaQ00422 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
GabpaQ00422 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
GabpaQ00422 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
GabpaQ00422 Gm10459-201ENSMUST00000202708 1155 ntBASIC19.84■□□□□ 0.77
GabpaQ00422 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
GabpaQ00422 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
GabpaQ00422 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
GabpaQ00422 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
GabpaQ00422 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
GabpaQ00422 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
GabpaQ00422 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
GabpaQ00422 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
GabpaQ00422 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
GabpaQ00422 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
GabpaQ00422 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
GabpaQ00422 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC19.84■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms