Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Smarcc1P97496 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC21.84■■□□□ 1.09
Smarcc1P97496 Gm43545-201ENSMUST00000196765 2779 ntBASIC21.83■■□□□ 1.09
Smarcc1P97496 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Smarcc1P97496 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Smarcc1P97496 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
Smarcc1P97496 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC21.83■■□□□ 1.09
Smarcc1P97496 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC21.83■■□□□ 1.09
Smarcc1P97496 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
Smarcc1P97496 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
Smarcc1P97496 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC21.83■■□□□ 1.09
Smarcc1P97496 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Smarcc1P97496 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC21.83■■□□□ 1.09
Smarcc1P97496 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Smarcc1P97496 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC21.83■■□□□ 1.08
Smarcc1P97496 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Smarcc1P97496 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
Smarcc1P97496 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Smarcc1P97496 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Smarcc1P97496 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Smarcc1P97496 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC21.82■■□□□ 1.08
Smarcc1P97496 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Smarcc1P97496 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Smarcc1P97496 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC21.82■■□□□ 1.08
Smarcc1P97496 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Smarcc1P97496 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Smarcc1P97496 Olfr129-201ENSMUST00000122318 993 ntBASIC21.82■■□□□ 1.08
Smarcc1P97496 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC21.82■■□□□ 1.08
Smarcc1P97496 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
Smarcc1P97496 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC21.82■■□□□ 1.08
Smarcc1P97496 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC21.82■■□□□ 1.08
Smarcc1P97496 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC21.82■■□□□ 1.08
Smarcc1P97496 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC21.82■■□□□ 1.08
Smarcc1P97496 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Smarcc1P97496 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Smarcc1P97496 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC21.82■■□□□ 1.08
Smarcc1P97496 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Smarcc1P97496 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Smarcc1P97496 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Smarcc1P97496 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Smarcc1P97496 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
Smarcc1P97496 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Smarcc1P97496 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Smarcc1P97496 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Smarcc1P97496 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
Smarcc1P97496 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Smarcc1P97496 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC21.81■■□□□ 1.08
Smarcc1P97496 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
Smarcc1P97496 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Smarcc1P97496 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Smarcc1P97496 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
Smarcc1P97496 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC21.81■■□□□ 1.08
Smarcc1P97496 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC21.81■■□□□ 1.08
Smarcc1P97496 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Smarcc1P97496 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Smarcc1P97496 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Smarcc1P97496 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Smarcc1P97496 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
Smarcc1P97496 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Smarcc1P97496 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Smarcc1P97496 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Smarcc1P97496 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
Smarcc1P97496 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Smarcc1P97496 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC21.8■■□□□ 1.08
Smarcc1P97496 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
Smarcc1P97496 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Smarcc1P97496 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Smarcc1P97496 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
Smarcc1P97496 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Smarcc1P97496 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
Smarcc1P97496 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC21.79■■□□□ 1.08
Smarcc1P97496 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
Smarcc1P97496 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Smarcc1P97496 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC21.79■■□□□ 1.08
Smarcc1P97496 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC21.79■■□□□ 1.08
Smarcc1P97496 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Smarcc1P97496 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Smarcc1P97496 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Smarcc1P97496 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Smarcc1P97496 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
Smarcc1P97496 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Smarcc1P97496 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Smarcc1P97496 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
Smarcc1P97496 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC21.78■■□□□ 1.08
Smarcc1P97496 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Smarcc1P97496 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
Smarcc1P97496 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Smarcc1P97496 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
Smarcc1P97496 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC21.78■■□□□ 1.08
Smarcc1P97496 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Smarcc1P97496 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Smarcc1P97496 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Smarcc1P97496 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Smarcc1P97496 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Smarcc1P97496 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Smarcc1P97496 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
Smarcc1P97496 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Smarcc1P97496 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC21.77■■□□□ 1.08
Smarcc1P97496 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Smarcc1P97496 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms