Protein–RNA interactions for Protein: P97386

Lig3, DNA ligase 3, mousemouse

Predictions only

Length 1,015 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3P97386 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC19■□□□□ 0.63
Lig3P97386 Gm11539-201ENSMUST00000119837 557 ntBASIC19■□□□□ 0.63
Lig3P97386 Gm13436-201ENSMUST00000120418 567 ntBASIC19■□□□□ 0.63
Lig3P97386 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC19■□□□□ 0.63
Lig3P97386 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
Lig3P97386 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC19■□□□□ 0.63
Lig3P97386 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC19■□□□□ 0.63
Lig3P97386 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Lig3P97386 Wnt10b-205ENSMUST00000226846 1204 ntBASIC19■□□□□ 0.63
Lig3P97386 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Lig3P97386 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Lig3P97386 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC19■□□□□ 0.63
Lig3P97386 Gm42922-201ENSMUST00000195887 2078 ntBASIC19■□□□□ 0.63
Lig3P97386 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC19■□□□□ 0.63
Lig3P97386 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Lig3P97386 Gm45244-201ENSMUST00000211328 2200 ntBASIC19■□□□□ 0.63
Lig3P97386 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC19■□□□□ 0.63
Lig3P97386 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Lig3P97386 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Lig3P97386 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Lig3P97386 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Lig3P97386 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
Lig3P97386 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Lig3P97386 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Lig3P97386 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Lig3P97386 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Lig3P97386 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Lig3P97386 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC18.99■□□□□ 0.63
Lig3P97386 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Lig3P97386 Gm7889-201ENSMUST00000185591 958 ntBASIC18.99■□□□□ 0.63
Lig3P97386 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Lig3P97386 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Lig3P97386 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Lig3P97386 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC18.99■□□□□ 0.63
Lig3P97386 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Lig3P97386 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Lig3P97386 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Lig3P97386 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Lig3P97386 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Lig3P97386 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC18.98■□□□□ 0.63
Lig3P97386 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Lig3P97386 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Lig3P97386 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Lig3P97386 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Lig3P97386 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
Lig3P97386 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Lig3P97386 Gm16042-201ENSMUST00000204813 1247 ntBASIC18.98■□□□□ 0.63
Lig3P97386 AC107452.1-201ENSMUST00000227963 481 ntBASIC18.98■□□□□ 0.63
Lig3P97386 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Lig3P97386 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Lig3P97386 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Lig3P97386 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Lig3P97386 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Lig3P97386 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC18.98■□□□□ 0.63
Lig3P97386 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Lig3P97386 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Lig3P97386 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Lig3P97386 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Lig3P97386 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Lig3P97386 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Lig3P97386 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC18.97■□□□□ 0.63
Lig3P97386 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Lig3P97386 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Lig3P97386 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Lig3P97386 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC18.97■□□□□ 0.63
Lig3P97386 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Lig3P97386 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Lig3P97386 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC18.97■□□□□ 0.63
Lig3P97386 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Lig3P97386 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Lig3P97386 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Lig3P97386 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Lig3P97386 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
Lig3P97386 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Lig3P97386 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Lig3P97386 AC160393.1-201ENSMUST00000218378 1279 ntBASIC18.96■□□□□ 0.63
Lig3P97386 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC18.96■□□□□ 0.63
Lig3P97386 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Lig3P97386 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Lig3P97386 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Lig3P97386 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Lig3P97386 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Lig3P97386 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
Lig3P97386 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Lig3P97386 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Lig3P97386 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Lig3P97386 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Lig3P97386 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Lig3P97386 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC18.95■□□□□ 0.62
Lig3P97386 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Lig3P97386 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Lig3P97386 Gm43183-201ENSMUST00000200632 547 ntBASIC18.95■□□□□ 0.62
Lig3P97386 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
Lig3P97386 AC156016.1-201ENSMUST00000227190 1035 ntBASIC18.95■□□□□ 0.62
Lig3P97386 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC18.95■□□□□ 0.62
Lig3P97386 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Lig3P97386 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC18.95■□□□□ 0.62
Lig3P97386 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Lig3P97386 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Lig3P97386 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms