Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Trim43bP86448 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trim43bP86448 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trim43bP86448 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Trim43bP86448 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC17.98■□□□□ 0.47
Trim43bP86448 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC17.98■□□□□ 0.47
Trim43bP86448 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim43bP86448 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC17.98■□□□□ 0.47
Trim43bP86448 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Trim43bP86448 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim43bP86448 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17.98■□□□□ 0.47
Trim43bP86448 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim43bP86448 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC17.98■□□□□ 0.47
Trim43bP86448 Gm8520-201ENSMUST00000186517 868 ntBASIC17.98■□□□□ 0.47
Trim43bP86448 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Trim43bP86448 AC160393.1-201ENSMUST00000218378 1279 ntBASIC17.98■□□□□ 0.47
Trim43bP86448 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim43bP86448 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim43bP86448 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim43bP86448 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim43bP86448 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim43bP86448 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim43bP86448 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC17.98■□□□□ 0.47
Trim43bP86448 Gm5421-201ENSMUST00000181698 2354 ntBASIC17.98■□□□□ 0.47
Trim43bP86448 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim43bP86448 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim43bP86448 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim43bP86448 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Trim43bP86448 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim43bP86448 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim43bP86448 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Trim43bP86448 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim43bP86448 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim43bP86448 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim43bP86448 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Trim43bP86448 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC17.97■□□□□ 0.47
Trim43bP86448 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Trim43bP86448 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim43bP86448 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim43bP86448 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim43bP86448 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim43bP86448 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Trim43bP86448 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim43bP86448 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim43bP86448 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC17.96■□□□□ 0.47
Trim43bP86448 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim43bP86448 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Trim43bP86448 Gm38345-201ENSMUST00000192635 1748 ntBASIC17.96■□□□□ 0.47
Trim43bP86448 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Trim43bP86448 Gm12527-201ENSMUST00000117967 564 ntBASIC17.96■□□□□ 0.47
Trim43bP86448 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC17.96■□□□□ 0.47
Trim43bP86448 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC17.96■□□□□ 0.47
Trim43bP86448 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC17.96■□□□□ 0.47
Trim43bP86448 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Trim43bP86448 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim43bP86448 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim43bP86448 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim43bP86448 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim43bP86448 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim43bP86448 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC17.96■□□□□ 0.47
Trim43bP86448 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim43bP86448 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim43bP86448 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.46
Trim43bP86448 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Trim43bP86448 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
Trim43bP86448 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC17.95■□□□□ 0.46
Trim43bP86448 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim43bP86448 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Trim43bP86448 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim43bP86448 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim43bP86448 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim43bP86448 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Trim43bP86448 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim43bP86448 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Trim43bP86448 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim43bP86448 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim43bP86448 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC17.95■□□□□ 0.46
Trim43bP86448 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim43bP86448 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim43bP86448 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC17.94■□□□□ 0.46
Trim43bP86448 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC17.94■□□□□ 0.46
Trim43bP86448 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim43bP86448 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim43bP86448 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
Trim43bP86448 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim43bP86448 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Trim43bP86448 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim43bP86448 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim43bP86448 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim43bP86448 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim43bP86448 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
Trim43bP86448 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim43bP86448 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim43bP86448 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim43bP86448 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim43bP86448 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim43bP86448 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim43bP86448 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim43bP86448 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Trim43bP86448 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC17.93■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms