Protein–RNA interactions for Protein: P82348

Sgcg, Gamma-sarcoglycan, mousemouse

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcgP82348 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SgcgP82348 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SgcgP82348 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SgcgP82348 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SgcgP82348 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
SgcgP82348 Gm43353-201ENSMUST00000199224 1295 ntBASIC17.25■□□□□ 0.35
SgcgP82348 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC17.25■□□□□ 0.35
SgcgP82348 AC159205.6-201ENSMUST00000224935 887 ntBASIC17.25■□□□□ 0.35
SgcgP82348 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
SgcgP82348 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SgcgP82348 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SgcgP82348 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SgcgP82348 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SgcgP82348 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SgcgP82348 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SgcgP82348 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SgcgP82348 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SgcgP82348 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC17.24■□□□□ 0.35
SgcgP82348 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
SgcgP82348 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SgcgP82348 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SgcgP82348 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC17.24■□□□□ 0.35
SgcgP82348 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC17.24■□□□□ 0.35
SgcgP82348 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SgcgP82348 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SgcgP82348 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
SgcgP82348 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SgcgP82348 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.24■□□□□ 0.35
SgcgP82348 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SgcgP82348 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SgcgP82348 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SgcgP82348 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
SgcgP82348 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SgcgP82348 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SgcgP82348 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
SgcgP82348 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SgcgP82348 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SgcgP82348 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SgcgP82348 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SgcgP82348 Gm24841-201ENSMUST00000158676 357 ntBASIC17.23■□□□□ 0.35
SgcgP82348 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SgcgP82348 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC17.23■□□□□ 0.35
SgcgP82348 AC130671.1-201ENSMUST00000227384 1237 ntBASIC17.23■□□□□ 0.35
SgcgP82348 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SgcgP82348 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SgcgP82348 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SgcgP82348 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SgcgP82348 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
SgcgP82348 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SgcgP82348 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SgcgP82348 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
SgcgP82348 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SgcgP82348 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SgcgP82348 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
SgcgP82348 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SgcgP82348 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC17.22■□□□□ 0.35
SgcgP82348 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SgcgP82348 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SgcgP82348 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SgcgP82348 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC17.22■□□□□ 0.35
SgcgP82348 Gm27463-201ENSMUST00000183569 57 ntBASIC17.22■□□□□ 0.35
SgcgP82348 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
SgcgP82348 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SgcgP82348 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SgcgP82348 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SgcgP82348 Idnk-204ENSMUST00000226010 1898 ntBASIC17.22■□□□□ 0.35
SgcgP82348 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SgcgP82348 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SgcgP82348 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SgcgP82348 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SgcgP82348 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC17.21■□□□□ 0.35
SgcgP82348 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SgcgP82348 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SgcgP82348 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SgcgP82348 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SgcgP82348 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
SgcgP82348 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
SgcgP82348 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
SgcgP82348 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SgcgP82348 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SgcgP82348 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SgcgP82348 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SgcgP82348 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
SgcgP82348 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SgcgP82348 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SgcgP82348 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
SgcgP82348 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SgcgP82348 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SgcgP82348 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC17.2■□□□□ 0.34
SgcgP82348 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC17.2■□□□□ 0.34
SgcgP82348 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SgcgP82348 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SgcgP82348 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SgcgP82348 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SgcgP82348 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SgcgP82348 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SgcgP82348 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC17.2■□□□□ 0.34
SgcgP82348 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SgcgP82348 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SgcgP82348 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms