Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC18.97■□□□□ 0.63
CiitaP79621 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CiitaP79621 Gm4217-201ENSMUST00000182243 1002 ntBASIC18.97■□□□□ 0.63
CiitaP79621 Gm7791-201ENSMUST00000219066 539 ntBASIC18.97■□□□□ 0.63
CiitaP79621 AC159205.6-201ENSMUST00000224935 887 ntBASIC18.97■□□□□ 0.63
CiitaP79621 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CiitaP79621 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CiitaP79621 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CiitaP79621 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CiitaP79621 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
CiitaP79621 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CiitaP79621 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CiitaP79621 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CiitaP79621 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CiitaP79621 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
CiitaP79621 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CiitaP79621 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
CiitaP79621 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CiitaP79621 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC18.96■□□□□ 0.63
CiitaP79621 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC18.96■□□□□ 0.63
CiitaP79621 Gm37025-201ENSMUST00000195159 829 ntBASIC18.96■□□□□ 0.63
CiitaP79621 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
CiitaP79621 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CiitaP79621 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CiitaP79621 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CiitaP79621 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.96■□□□□ 0.63
CiitaP79621 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CiitaP79621 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CiitaP79621 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CiitaP79621 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CiitaP79621 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC18.95■□□□□ 0.62
CiitaP79621 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CiitaP79621 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CiitaP79621 Il3ra-202ENSMUST00000223589 738 ntBASIC18.95■□□□□ 0.62
CiitaP79621 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CiitaP79621 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
CiitaP79621 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CiitaP79621 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CiitaP79621 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CiitaP79621 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CiitaP79621 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CiitaP79621 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CiitaP79621 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CiitaP79621 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CiitaP79621 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CiitaP79621 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
CiitaP79621 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC18.94■□□□□ 0.62
CiitaP79621 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC18.94■□□□□ 0.62
CiitaP79621 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CiitaP79621 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
CiitaP79621 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CiitaP79621 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CiitaP79621 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CiitaP79621 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC18.94■□□□□ 0.62
CiitaP79621 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CiitaP79621 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CiitaP79621 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CiitaP79621 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CiitaP79621 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CiitaP79621 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
CiitaP79621 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CiitaP79621 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CiitaP79621 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CiitaP79621 Gm45058-201ENSMUST00000205810 766 ntBASIC18.93■□□□□ 0.62
CiitaP79621 Gm9731-201ENSMUST00000209480 747 ntBASIC18.93■□□□□ 0.62
CiitaP79621 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CiitaP79621 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CiitaP79621 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CiitaP79621 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
CiitaP79621 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CiitaP79621 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC18.92■□□□□ 0.62
CiitaP79621 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
CiitaP79621 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC18.92■□□□□ 0.62
CiitaP79621 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CiitaP79621 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CiitaP79621 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC18.92■□□□□ 0.62
CiitaP79621 Gm17661-201ENSMUST00000170317 270 ntBASIC18.92■□□□□ 0.62
CiitaP79621 Gm2274-201ENSMUST00000184539 609 ntBASIC18.92■□□□□ 0.62
CiitaP79621 Gm18959-201ENSMUST00000208954 655 ntBASIC18.92■□□□□ 0.62
CiitaP79621 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC18.92■□□□□ 0.62
CiitaP79621 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CiitaP79621 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CiitaP79621 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CiitaP79621 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CiitaP79621 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CiitaP79621 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CiitaP79621 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CiitaP79621 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CiitaP79621 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CiitaP79621 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC18.91■□□□□ 0.62
CiitaP79621 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CiitaP79621 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CiitaP79621 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CiitaP79621 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CiitaP79621 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CiitaP79621 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
CiitaP79621 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC18.91■□□□□ 0.62
CiitaP79621 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CiitaP79621 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC18.91■□□□□ 0.62
CiitaP79621 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms