Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pdlim4P70271 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pdlim4P70271 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
Pdlim4P70271 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pdlim4P70271 Gm15378-201ENSMUST00000121894 207 ntBASIC14.53□□□□□ -0.08
Pdlim4P70271 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Pdlim4P70271 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Pdlim4P70271 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC14.53□□□□□ -0.08
Pdlim4P70271 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Pdlim4P70271 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC14.53□□□□□ -0.08
Pdlim4P70271 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC14.53□□□□□ -0.08
Pdlim4P70271 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC14.53□□□□□ -0.08
Pdlim4P70271 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Pdlim4P70271 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pdlim4P70271 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pdlim4P70271 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pdlim4P70271 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Pdlim4P70271 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pdlim4P70271 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Pdlim4P70271 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Pdlim4P70271 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pdlim4P70271 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pdlim4P70271 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Pdlim4P70271 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Pdlim4P70271 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pdlim4P70271 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pdlim4P70271 Gm45560-201ENSMUST00000211492 1472 ntBASIC14.52□□□□□ -0.08
Pdlim4P70271 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pdlim4P70271 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pdlim4P70271 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pdlim4P70271 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC14.52□□□□□ -0.09
Pdlim4P70271 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Pdlim4P70271 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pdlim4P70271 Gm29241-201ENSMUST00000189260 1096 ntBASIC14.52□□□□□ -0.09
Pdlim4P70271 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pdlim4P70271 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pdlim4P70271 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Pdlim4P70271 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pdlim4P70271 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.09
Pdlim4P70271 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Pdlim4P70271 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pdlim4P70271 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pdlim4P70271 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Pdlim4P70271 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pdlim4P70271 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Pdlim4P70271 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC14.51□□□□□ -0.09
Pdlim4P70271 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pdlim4P70271 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pdlim4P70271 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pdlim4P70271 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Pdlim4P70271 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC14.51□□□□□ -0.09
Pdlim4P70271 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC14.51□□□□□ -0.09
Pdlim4P70271 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Pdlim4P70271 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pdlim4P70271 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pdlim4P70271 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Pdlim4P70271 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pdlim4P70271 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Pdlim4P70271 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Pdlim4P70271 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC14.5□□□□□ -0.09
Pdlim4P70271 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pdlim4P70271 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Pdlim4P70271 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pdlim4P70271 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pdlim4P70271 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pdlim4P70271 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC14.5□□□□□ -0.09
Pdlim4P70271 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pdlim4P70271 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pdlim4P70271 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pdlim4P70271 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pdlim4P70271 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Pdlim4P70271 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Pdlim4P70271 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC14.5□□□□□ -0.09
Pdlim4P70271 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pdlim4P70271 Gm10812-201ENSMUST00000099864 546 ntBASIC14.5□□□□□ -0.09
Pdlim4P70271 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pdlim4P70271 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC14.5□□□□□ -0.09
Pdlim4P70271 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pdlim4P70271 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pdlim4P70271 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pdlim4P70271 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pdlim4P70271 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pdlim4P70271 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pdlim4P70271 Dmtn-207ENSMUST00000228001 2437 ntBASIC14.5□□□□□ -0.09
Pdlim4P70271 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Pdlim4P70271 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pdlim4P70271 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pdlim4P70271 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pdlim4P70271 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pdlim4P70271 Gm10418-201ENSMUST00000100943 576 ntBASIC14.49□□□□□ -0.09
Pdlim4P70271 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Pdlim4P70271 Mir2861-201ENSMUST00000175539 82 ntBASIC14.49□□□□□ -0.09
Pdlim4P70271 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Pdlim4P70271 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Pdlim4P70271 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pdlim4P70271 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pdlim4P70271 AC121598.2-201ENSMUST00000228376 2325 ntBASIC14.49□□□□□ -0.09
Pdlim4P70271 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Pdlim4P70271 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pdlim4P70271 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC14.49□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms