Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rpl39P62892 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Rpl39P62892 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Rpl39P62892 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Rpl39P62892 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rpl39P62892 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rpl39P62892 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rpl39P62892 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Rpl39P62892 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
Rpl39P62892 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Rpl39P62892 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rpl39P62892 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC12.5□□□□□ -0.41
Rpl39P62892 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Rpl39P62892 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rpl39P62892 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rpl39P62892 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rpl39P62892 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rpl39P62892 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC12.5□□□□□ -0.41
Rpl39P62892 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rpl39P62892 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rpl39P62892 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC12.5□□□□□ -0.41
Rpl39P62892 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Rpl39P62892 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC12.5□□□□□ -0.41
Rpl39P62892 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rpl39P62892 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC12.5□□□□□ -0.41
Rpl39P62892 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rpl39P62892 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Rpl39P62892 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rpl39P62892 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Rpl39P62892 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Rpl39P62892 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Rpl39P62892 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rpl39P62892 Gm28265-201ENSMUST00000188201 2319 ntBASIC12.49□□□□□ -0.41
Rpl39P62892 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Rpl39P62892 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Rpl39P62892 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC12.49□□□□□ -0.41
Rpl39P62892 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rpl39P62892 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Rpl39P62892 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Rpl39P62892 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Rpl39P62892 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Rpl39P62892 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Rpl39P62892 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Rpl39P62892 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC12.49□□□□□ -0.41
Rpl39P62892 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC12.49□□□□□ -0.41
Rpl39P62892 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC12.49□□□□□ -0.41
Rpl39P62892 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Rpl39P62892 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Rpl39P62892 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rpl39P62892 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rpl39P62892 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Rpl39P62892 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rpl39P62892 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rpl39P62892 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rpl39P62892 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rpl39P62892 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Rpl39P62892 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Rpl39P62892 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Rpl39P62892 Gm44544-201ENSMUST00000207052 1844 ntBASIC12.48□□□□□ -0.41
Rpl39P62892 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rpl39P62892 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rpl39P62892 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rpl39P62892 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Rpl39P62892 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Rpl39P62892 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Rpl39P62892 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Rpl39P62892 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rpl39P62892 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC12.48□□□□□ -0.41
Rpl39P62892 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rpl39P62892 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rpl39P62892 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Rpl39P62892 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Rpl39P62892 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rpl39P62892 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rpl39P62892 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Rpl39P62892 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rpl39P62892 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
Rpl39P62892 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rpl39P62892 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Rpl39P62892 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC12.47□□□□□ -0.41
Rpl39P62892 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rpl39P62892 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rpl39P62892 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rpl39P62892 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rpl39P62892 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rpl39P62892 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rpl39P62892 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC12.47□□□□□ -0.41
Rpl39P62892 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rpl39P62892 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Rpl39P62892 Gm22325-201ENSMUST00000158904 308 ntBASIC12.47□□□□□ -0.41
Rpl39P62892 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rpl39P62892 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
Rpl39P62892 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC12.47□□□□□ -0.41
Rpl39P62892 Gm13241-201ENSMUST00000094493 780 ntBASIC12.47□□□□□ -0.41
Rpl39P62892 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Rpl39P62892 Gm20628-201ENSMUST00000177363 3215 ntBASIC12.47□□□□□ -0.41
Rpl39P62892 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rpl39P62892 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rpl39P62892 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rpl39P62892 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms