Protein–RNA interactions for Protein: P62322

Lsm5, U6 snRNA-associated Sm-like protein LSm5, mousemouse

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm5P62322 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Lsm5P62322 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Lsm5P62322 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC14.63□□□□□ -0.07
Lsm5P62322 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Lsm5P62322 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Lsm5P62322 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Lsm5P62322 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Lsm5P62322 Gm38205-201ENSMUST00000192243 258 ntBASIC14.63□□□□□ -0.07
Lsm5P62322 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Lsm5P62322 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Lsm5P62322 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Lsm5P62322 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Lsm5P62322 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Lsm5P62322 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Lsm5P62322 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Lsm5P62322 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Lsm5P62322 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Lsm5P62322 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Lsm5P62322 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Lsm5P62322 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Lsm5P62322 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Lsm5P62322 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Lsm5P62322 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Lsm5P62322 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Lsm5P62322 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC14.62□□□□□ -0.07
Lsm5P62322 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Lsm5P62322 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Lsm5P62322 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Lsm5P62322 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC14.62□□□□□ -0.07
Lsm5P62322 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Lsm5P62322 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Lsm5P62322 AC093043.1-201ENSMUST00000226700 898 ntBASIC14.62□□□□□ -0.07
Lsm5P62322 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Lsm5P62322 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Lsm5P62322 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Lsm5P62322 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Lsm5P62322 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Lsm5P62322 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Lsm5P62322 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Lsm5P62322 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Lsm5P62322 Gm38345-201ENSMUST00000192635 1748 ntBASIC14.61□□□□□ -0.07
Lsm5P62322 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC14.61□□□□□ -0.07
Lsm5P62322 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Lsm5P62322 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Lsm5P62322 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Lsm5P62322 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Lsm5P62322 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
Lsm5P62322 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Lsm5P62322 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Lsm5P62322 Smad6-203ENSMUST00000179458 273 ntBASIC14.61□□□□□ -0.07
Lsm5P62322 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Lsm5P62322 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Lsm5P62322 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Lsm5P62322 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC14.61□□□□□ -0.07
Lsm5P62322 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Lsm5P62322 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Lsm5P62322 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Lsm5P62322 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Lsm5P62322 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Lsm5P62322 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Lsm5P62322 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Lsm5P62322 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Lsm5P62322 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Lsm5P62322 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Lsm5P62322 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Lsm5P62322 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Lsm5P62322 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC14.6□□□□□ -0.07
Lsm5P62322 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Lsm5P62322 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Lsm5P62322 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Lsm5P62322 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC14.6□□□□□ -0.07
Lsm5P62322 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Lsm5P62322 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Lsm5P62322 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
Lsm5P62322 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Lsm5P62322 Gm12922-201ENSMUST00000120626 809 ntBASIC14.6□□□□□ -0.07
Lsm5P62322 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC14.6□□□□□ -0.07
Lsm5P62322 Idnk-204ENSMUST00000226010 1898 ntBASIC14.6□□□□□ -0.07
Lsm5P62322 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Lsm5P62322 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Lsm5P62322 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Lsm5P62322 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Lsm5P62322 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Lsm5P62322 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Lsm5P62322 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Lsm5P62322 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Lsm5P62322 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Lsm5P62322 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Lsm5P62322 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Lsm5P62322 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Lsm5P62322 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
Lsm5P62322 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
Lsm5P62322 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC14.59□□□□□ -0.07
Lsm5P62322 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Lsm5P62322 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Lsm5P62322 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Lsm5P62322 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Lsm5P62322 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Lsm5P62322 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Lsm5P62322 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms