Protein–RNA interactions for Protein: P61969

Lmo4, LIM domain transcription factor LMO4, mousemouse

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmo4P61969 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lmo4P61969 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lmo4P61969 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lmo4P61969 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Lmo4P61969 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lmo4P61969 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Lmo4P61969 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Lmo4P61969 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Lmo4P61969 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Lmo4P61969 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lmo4P61969 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lmo4P61969 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lmo4P61969 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Lmo4P61969 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lmo4P61969 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lmo4P61969 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lmo4P61969 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Lmo4P61969 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lmo4P61969 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
Lmo4P61969 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lmo4P61969 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Lmo4P61969 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lmo4P61969 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Lmo4P61969 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC14.15□□□□□ -0.14
Lmo4P61969 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lmo4P61969 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Lmo4P61969 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lmo4P61969 Gm7213-201ENSMUST00000215977 950 ntBASIC14.15□□□□□ -0.14
Lmo4P61969 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Lmo4P61969 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lmo4P61969 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Lmo4P61969 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Lmo4P61969 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lmo4P61969 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lmo4P61969 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lmo4P61969 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Lmo4P61969 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lmo4P61969 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC14.15□□□□□ -0.14
Lmo4P61969 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Lmo4P61969 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lmo4P61969 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lmo4P61969 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Lmo4P61969 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC14.14□□□□□ -0.15
Lmo4P61969 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Lmo4P61969 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lmo4P61969 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lmo4P61969 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lmo4P61969 Gm8258-201ENSMUST00000055593 1449 ntBASIC14.14□□□□□ -0.15
Lmo4P61969 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lmo4P61969 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Lmo4P61969 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Lmo4P61969 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Lmo4P61969 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Lmo4P61969 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lmo4P61969 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC14.13□□□□□ -0.15
Lmo4P61969 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Lmo4P61969 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Lmo4P61969 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lmo4P61969 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Lmo4P61969 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC14.13□□□□□ -0.15
Lmo4P61969 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lmo4P61969 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Lmo4P61969 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lmo4P61969 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC14.13□□□□□ -0.15
Lmo4P61969 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lmo4P61969 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lmo4P61969 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lmo4P61969 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lmo4P61969 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC14.13□□□□□ -0.15
Lmo4P61969 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lmo4P61969 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lmo4P61969 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC14.12□□□□□ -0.15
Lmo4P61969 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC14.12□□□□□ -0.15
Lmo4P61969 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC14.12□□□□□ -0.15
Lmo4P61969 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lmo4P61969 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lmo4P61969 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Lmo4P61969 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Lmo4P61969 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lmo4P61969 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Lmo4P61969 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lmo4P61969 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lmo4P61969 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC14.12□□□□□ -0.15
Lmo4P61969 Gm19721-201ENSMUST00000195284 1764 ntBASIC14.11□□□□□ -0.15
Lmo4P61969 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lmo4P61969 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lmo4P61969 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lmo4P61969 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lmo4P61969 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lmo4P61969 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Lmo4P61969 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC14.11□□□□□ -0.15
Lmo4P61969 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC14.11□□□□□ -0.15
Lmo4P61969 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC14.11□□□□□ -0.15
Lmo4P61969 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Lmo4P61969 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
Lmo4P61969 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lmo4P61969 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lmo4P61969 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lmo4P61969 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lmo4P61969 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms