Protein–RNA interactions for Protein: P56726

Smo, Smoothened homolog, mousemouse

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SmoP56726 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
SmoP56726 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SmoP56726 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC17.59■□□□□ 0.41
SmoP56726 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
SmoP56726 Gm27463-201ENSMUST00000183569 57 ntBASIC17.59■□□□□ 0.41
SmoP56726 Gm43353-201ENSMUST00000199224 1295 ntBASIC17.59■□□□□ 0.41
SmoP56726 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SmoP56726 AC158538.1-201ENSMUST00000225870 294 ntBASIC17.59■□□□□ 0.41
SmoP56726 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SmoP56726 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SmoP56726 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SmoP56726 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC17.58■□□□□ 0.41
SmoP56726 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SmoP56726 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
SmoP56726 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SmoP56726 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
SmoP56726 Gm29994-201ENSMUST00000195495 1193 ntBASIC17.58■□□□□ 0.4
SmoP56726 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC17.58■□□□□ 0.4
SmoP56726 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SmoP56726 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SmoP56726 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SmoP56726 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SmoP56726 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC17.58■□□□□ 0.4
SmoP56726 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
SmoP56726 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SmoP56726 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC17.58■□□□□ 0.4
SmoP56726 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SmoP56726 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SmoP56726 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SmoP56726 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
SmoP56726 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SmoP56726 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC17.57■□□□□ 0.4
SmoP56726 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
SmoP56726 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SmoP56726 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SmoP56726 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
SmoP56726 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SmoP56726 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SmoP56726 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SmoP56726 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC17.57■□□□□ 0.4
SmoP56726 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SmoP56726 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SmoP56726 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SmoP56726 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
SmoP56726 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SmoP56726 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SmoP56726 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SmoP56726 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SmoP56726 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC17.56■□□□□ 0.4
SmoP56726 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SmoP56726 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SmoP56726 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SmoP56726 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SmoP56726 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC17.56■□□□□ 0.4
SmoP56726 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC17.56■□□□□ 0.4
SmoP56726 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SmoP56726 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SmoP56726 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SmoP56726 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC17.55■□□□□ 0.4
SmoP56726 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC17.55■□□□□ 0.4
SmoP56726 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
SmoP56726 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC17.55■□□□□ 0.4
SmoP56726 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC17.55■□□□□ 0.4
SmoP56726 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SmoP56726 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SmoP56726 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC17.54■□□□□ 0.4
SmoP56726 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SmoP56726 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SmoP56726 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SmoP56726 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SmoP56726 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SmoP56726 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SmoP56726 Gm13836-201ENSMUST00000121159 501 ntBASIC17.54■□□□□ 0.4
SmoP56726 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SmoP56726 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SmoP56726 Gm7889-201ENSMUST00000185591 958 ntBASIC17.54■□□□□ 0.4
SmoP56726 Gm37025-201ENSMUST00000195159 829 ntBASIC17.54■□□□□ 0.4
SmoP56726 Gm7791-201ENSMUST00000219066 539 ntBASIC17.54■□□□□ 0.4
SmoP56726 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SmoP56726 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SmoP56726 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SmoP56726 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SmoP56726 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
SmoP56726 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SmoP56726 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SmoP56726 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC17.53■□□□□ 0.4
SmoP56726 Gm19721-201ENSMUST00000195284 1764 ntBASIC17.53■□□□□ 0.4
SmoP56726 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SmoP56726 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SmoP56726 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SmoP56726 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SmoP56726 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SmoP56726 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
SmoP56726 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
SmoP56726 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SmoP56726 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SmoP56726 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SmoP56726 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SmoP56726 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SmoP56726 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms