Protein–RNA interactions for Protein: P56183

Rrp1, Ribosomal RNA processing protein 1 homolog A, mousemouse

Known RBP Predictions only

Length 494 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1P56183 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC19.73■□□□□ 0.75
Rrp1P56183 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rrp1P56183 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rrp1P56183 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Rrp1P56183 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rrp1P56183 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rrp1P56183 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rrp1P56183 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rrp1P56183 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC19.73■□□□□ 0.75
Rrp1P56183 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rrp1P56183 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC19.72■□□□□ 0.75
Rrp1P56183 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC19.72■□□□□ 0.75
Rrp1P56183 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC19.72■□□□□ 0.75
Rrp1P56183 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Rrp1P56183 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rrp1P56183 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC19.72■□□□□ 0.75
Rrp1P56183 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Rrp1P56183 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rrp1P56183 Gm7290-201ENSMUST00000104990 617 ntBASIC19.72■□□□□ 0.75
Rrp1P56183 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC19.72■□□□□ 0.75
Rrp1P56183 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rrp1P56183 Gm12918-201ENSMUST00000120234 636 ntBASIC19.72■□□□□ 0.75
Rrp1P56183 Gm15710-201ENSMUST00000121821 636 ntBASIC19.72■□□□□ 0.75
Rrp1P56183 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Rrp1P56183 Gm5075-201ENSMUST00000196916 622 ntBASIC19.72■□□□□ 0.75
Rrp1P56183 Gm44549-201ENSMUST00000208351 577 ntBASIC19.72■□□□□ 0.75
Rrp1P56183 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC19.72■□□□□ 0.75
Rrp1P56183 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC19.72■□□□□ 0.75
Rrp1P56183 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC19.72■□□□□ 0.75
Rrp1P56183 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rrp1P56183 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rrp1P56183 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rrp1P56183 Gm45774-201ENSMUST00000211992 2665 ntBASIC19.71■□□□□ 0.75
Rrp1P56183 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rrp1P56183 Gm16401-202ENSMUST00000197463 2074 ntBASIC19.71■□□□□ 0.75
Rrp1P56183 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rrp1P56183 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rrp1P56183 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rrp1P56183 Gm42555-201ENSMUST00000199304 1039 ntBASIC19.71■□□□□ 0.75
Rrp1P56183 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC19.71■□□□□ 0.75
Rrp1P56183 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Rrp1P56183 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Rrp1P56183 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Rrp1P56183 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rrp1P56183 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rrp1P56183 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rrp1P56183 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC19.71■□□□□ 0.75
Rrp1P56183 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rrp1P56183 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rrp1P56183 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Rrp1P56183 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rrp1P56183 Haglr-201ENSMUST00000100000 2085 ntBASIC19.71■□□□□ 0.75
Rrp1P56183 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Rrp1P56183 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rrp1P56183 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rrp1P56183 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Rrp1P56183 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rrp1P56183 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC19.7■□□□□ 0.74
Rrp1P56183 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rrp1P56183 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Rrp1P56183 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Rrp1P56183 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
Rrp1P56183 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rrp1P56183 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rrp1P56183 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rrp1P56183 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rrp1P56183 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Rrp1P56183 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rrp1P56183 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Rrp1P56183 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rrp1P56183 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rrp1P56183 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rrp1P56183 Gm13401-201ENSMUST00000117074 291 ntBASIC19.69■□□□□ 0.74
Rrp1P56183 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rrp1P56183 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rrp1P56183 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rrp1P56183 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rrp1P56183 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Rrp1P56183 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rrp1P56183 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rrp1P56183 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rrp1P56183 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Rrp1P56183 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rrp1P56183 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rrp1P56183 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Rrp1P56183 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rrp1P56183 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Rrp1P56183 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC19.68■□□□□ 0.74
Rrp1P56183 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rrp1P56183 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rrp1P56183 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rrp1P56183 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC19.68■□□□□ 0.74
Rrp1P56183 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rrp1P56183 Flg-201ENSMUST00000050758 1488 ntBASIC19.67■□□□□ 0.74
Rrp1P56183 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rrp1P56183 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rrp1P56183 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rrp1P56183 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Rrp1P56183 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Rrp1P56183 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms