Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Nub1P54729 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC18.79■□□□□ 0.6
Nub1P54729 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nub1P54729 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nub1P54729 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nub1P54729 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Nub1P54729 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC18.79■□□□□ 0.6
Nub1P54729 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Nub1P54729 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Nub1P54729 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Nub1P54729 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nub1P54729 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Nub1P54729 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nub1P54729 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nub1P54729 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Nub1P54729 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Nub1P54729 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Nub1P54729 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Nub1P54729 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nub1P54729 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC18.78■□□□□ 0.6
Nub1P54729 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC18.78■□□□□ 0.6
Nub1P54729 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nub1P54729 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Nub1P54729 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nub1P54729 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nub1P54729 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nub1P54729 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nub1P54729 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC18.78■□□□□ 0.6
Nub1P54729 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Nub1P54729 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC18.78■□□□□ 0.6
Nub1P54729 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nub1P54729 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nub1P54729 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Nub1P54729 Zcchc6-207ENSMUST00000225576 2499 ntBASIC18.77■□□□□ 0.6
Nub1P54729 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nub1P54729 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
Nub1P54729 Gm12382-201ENSMUST00000122005 922 ntBASIC18.77■□□□□ 0.6
Nub1P54729 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC18.77■□□□□ 0.6
Nub1P54729 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nub1P54729 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Nub1P54729 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nub1P54729 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Nub1P54729 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Nub1P54729 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC18.77■□□□□ 0.59
Nub1P54729 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Nub1P54729 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
Nub1P54729 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Nub1P54729 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nub1P54729 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Nub1P54729 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nub1P54729 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC18.76■□□□□ 0.59
Nub1P54729 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nub1P54729 AC153881.1-201ENSMUST00000214448 284 ntBASIC18.76■□□□□ 0.59
Nub1P54729 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nub1P54729 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nub1P54729 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nub1P54729 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nub1P54729 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nub1P54729 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
Nub1P54729 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nub1P54729 Gm6598-201ENSMUST00000202719 2615 ntBASIC18.75■□□□□ 0.59
Nub1P54729 CT010444.2-201ENSMUST00000217877 1629 ntBASIC18.75■□□□□ 0.59
Nub1P54729 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nub1P54729 Gm37194-201ENSMUST00000193092 3031 ntBASIC18.75■□□□□ 0.59
Nub1P54729 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nub1P54729 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Nub1P54729 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Nub1P54729 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
Nub1P54729 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Nub1P54729 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nub1P54729 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nub1P54729 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nub1P54729 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nub1P54729 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nub1P54729 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC18.75■□□□□ 0.59
Nub1P54729 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nub1P54729 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC18.75■□□□□ 0.59
Nub1P54729 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nub1P54729 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nub1P54729 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nub1P54729 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nub1P54729 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nub1P54729 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC18.74■□□□□ 0.59
Nub1P54729 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nub1P54729 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
Nub1P54729 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nub1P54729 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Nub1P54729 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Nub1P54729 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC18.74■□□□□ 0.59
Nub1P54729 Gm10812-201ENSMUST00000099864 546 ntBASIC18.74■□□□□ 0.59
Nub1P54729 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Nub1P54729 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nub1P54729 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nub1P54729 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Nub1P54729 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
Nub1P54729 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nub1P54729 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nub1P54729 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nub1P54729 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nub1P54729 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC18.73■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms