Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Msh6P54276 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Msh6P54276 Gm27389-201ENSMUST00000183622 195 ntBASIC22.25■■□□□ 1.15
Msh6P54276 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Msh6P54276 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
Msh6P54276 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Msh6P54276 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC22.24■■□□□ 1.15
Msh6P54276 Gm17807-201ENSMUST00000186869 298 ntBASIC22.24■■□□□ 1.15
Msh6P54276 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Msh6P54276 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Msh6P54276 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
Msh6P54276 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Msh6P54276 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
Msh6P54276 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Msh6P54276 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Msh6P54276 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Msh6P54276 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Msh6P54276 Spsb2-203ENSMUST00000112473 1322 ntBASIC22.23■■□□□ 1.15
Msh6P54276 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Msh6P54276 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Msh6P54276 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Msh6P54276 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Msh6P54276 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
Msh6P54276 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Msh6P54276 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Msh6P54276 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Msh6P54276 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Msh6P54276 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Msh6P54276 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Msh6P54276 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
Msh6P54276 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Msh6P54276 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Msh6P54276 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Msh6P54276 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC22.21■■□□□ 1.15
Msh6P54276 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
Msh6P54276 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Msh6P54276 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC22.21■■□□□ 1.15
Msh6P54276 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC22.21■■□□□ 1.15
Msh6P54276 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
Msh6P54276 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Msh6P54276 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Msh6P54276 Gm17808-201ENSMUST00000200859 894 ntBASIC22.21■■□□□ 1.15
Msh6P54276 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
Msh6P54276 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
Msh6P54276 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Msh6P54276 Gm43272-201ENSMUST00000200599 1584 ntBASIC22.2■■□□□ 1.15
Msh6P54276 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Msh6P54276 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC22.2■■□□□ 1.14
Msh6P54276 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Msh6P54276 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Msh6P54276 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Msh6P54276 Gm18669-201ENSMUST00000216049 778 ntBASIC22.2■■□□□ 1.14
Msh6P54276 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC22.2■■□□□ 1.14
Msh6P54276 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Msh6P54276 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Msh6P54276 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Msh6P54276 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Msh6P54276 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Msh6P54276 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Msh6P54276 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC22.19■■□□□ 1.14
Msh6P54276 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Msh6P54276 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Msh6P54276 Il3ra-202ENSMUST00000223589 738 ntBASIC22.19■■□□□ 1.14
Msh6P54276 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Msh6P54276 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Msh6P54276 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC22.18■■□□□ 1.14
Msh6P54276 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
Msh6P54276 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Msh6P54276 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Msh6P54276 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Msh6P54276 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
Msh6P54276 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Msh6P54276 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Msh6P54276 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Msh6P54276 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
Msh6P54276 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Msh6P54276 Umpk-ps-201ENSMUST00000211897 827 ntBASIC22.17■■□□□ 1.14
Msh6P54276 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Msh6P54276 Gm7461-201ENSMUST00000058918 827 ntBASIC22.17■■□□□ 1.14
Msh6P54276 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Msh6P54276 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Msh6P54276 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Msh6P54276 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Msh6P54276 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Msh6P54276 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Msh6P54276 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Msh6P54276 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Msh6P54276 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Msh6P54276 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Msh6P54276 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Msh6P54276 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Msh6P54276 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Msh6P54276 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Msh6P54276 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
Msh6P54276 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Msh6P54276 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Msh6P54276 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
Msh6P54276 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Msh6P54276 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Msh6P54276 Gm7153-201ENSMUST00000117092 455 ntBASIC22.15■■□□□ 1.14
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms