Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sox1P53783 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sox1P53783 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sox1P53783 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sox1P53783 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Sox1P53783 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC17.86■□□□□ 0.45
Sox1P53783 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sox1P53783 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Sox1P53783 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC17.86■□□□□ 0.45
Sox1P53783 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Sox1P53783 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Sox1P53783 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Sox1P53783 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC17.85■□□□□ 0.45
Sox1P53783 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC17.85■□□□□ 0.45
Sox1P53783 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC17.85■□□□□ 0.45
Sox1P53783 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Sox1P53783 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Sox1P53783 Gm6376-201ENSMUST00000209407 580 ntBASIC17.85■□□□□ 0.45
Sox1P53783 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Sox1P53783 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Sox1P53783 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Sox1P53783 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Sox1P53783 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC17.84■□□□□ 0.45
Sox1P53783 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sox1P53783 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC17.84■□□□□ 0.45
Sox1P53783 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Sox1P53783 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC17.84■□□□□ 0.45
Sox1P53783 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sox1P53783 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Sox1P53783 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sox1P53783 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sox1P53783 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sox1P53783 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sox1P53783 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sox1P53783 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Sox1P53783 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC17.84■□□□□ 0.45
Sox1P53783 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sox1P53783 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sox1P53783 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sox1P53783 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sox1P53783 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Sox1P53783 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC17.84■□□□□ 0.45
Sox1P53783 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sox1P53783 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Sox1P53783 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Sox1P53783 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Sox1P53783 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC17.83■□□□□ 0.44
Sox1P53783 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC17.83■□□□□ 0.44
Sox1P53783 Gm14822-201ENSMUST00000122247 291 ntBASIC17.83■□□□□ 0.44
Sox1P53783 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC17.83■□□□□ 0.44
Sox1P53783 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Sox1P53783 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Sox1P53783 Bloc1s5-203ENSMUST00000224902 612 ntBASIC17.83■□□□□ 0.44
Sox1P53783 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Sox1P53783 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC17.83■□□□□ 0.44
Sox1P53783 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Sox1P53783 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Sox1P53783 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Sox1P53783 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Sox1P53783 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC17.83■□□□□ 0.44
Sox1P53783 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Sox1P53783 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC17.82■□□□□ 0.44
Sox1P53783 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Sox1P53783 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sox1P53783 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sox1P53783 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sox1P53783 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sox1P53783 Gm8097-201ENSMUST00000117903 829 ntBASIC17.82■□□□□ 0.44
Sox1P53783 Gm12644-201ENSMUST00000119935 606 ntBASIC17.82■□□□□ 0.44
Sox1P53783 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
Sox1P53783 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Sox1P53783 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Sox1P53783 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sox1P53783 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Sox1P53783 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Sox1P53783 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC17.82■□□□□ 0.44
Sox1P53783 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sox1P53783 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sox1P53783 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Sox1P53783 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sox1P53783 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sox1P53783 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sox1P53783 Gm37820-201ENSMUST00000194021 2147 ntBASIC17.81■□□□□ 0.44
Sox1P53783 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Sox1P53783 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sox1P53783 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Sox1P53783 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sox1P53783 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sox1P53783 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC17.81■□□□□ 0.44
Sox1P53783 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC17.81■□□□□ 0.44
Sox1P53783 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Sox1P53783 Gm42670-201ENSMUST00000201816 1292 ntBASIC17.81■□□□□ 0.44
Sox1P53783 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
Sox1P53783 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sox1P53783 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sox1P53783 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Sox1P53783 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC17.81■□□□□ 0.44
Sox1P53783 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sox1P53783 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sox1P53783 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms