Protein–RNA interactions for Protein: P50516

Atp6v1a, V-type proton ATPase catalytic subunit A, mousemouse

Known RBP Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp6v1aP50516 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Atp6v1aP50516 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Atp6v1aP50516 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC20.97■□□□□ 0.95
Atp6v1aP50516 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Atp6v1aP50516 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Atp6v1aP50516 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Atp6v1aP50516 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Atp6v1aP50516 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC20.96■□□□□ 0.95
Atp6v1aP50516 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC20.96■□□□□ 0.95
Atp6v1aP50516 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Atp6v1aP50516 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Atp6v1aP50516 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Atp6v1aP50516 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC20.96■□□□□ 0.95
Atp6v1aP50516 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Atp6v1aP50516 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Atp6v1aP50516 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Atp6v1aP50516 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Atp6v1aP50516 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC20.96■□□□□ 0.95
Atp6v1aP50516 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC20.96■□□□□ 0.95
Atp6v1aP50516 Otx2os1-206ENSMUST00000228153 787 ntBASIC20.96■□□□□ 0.95
Atp6v1aP50516 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Atp6v1aP50516 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Atp6v1aP50516 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Atp6v1aP50516 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Atp6v1aP50516 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Atp6v1aP50516 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Atp6v1aP50516 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
Atp6v1aP50516 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Atp6v1aP50516 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
Atp6v1aP50516 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
Atp6v1aP50516 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC20.95■□□□□ 0.94
Atp6v1aP50516 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Atp6v1aP50516 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
Atp6v1aP50516 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Atp6v1aP50516 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
Atp6v1aP50516 Gm6623-201ENSMUST00000173570 544 ntBASIC20.95■□□□□ 0.94
Atp6v1aP50516 Gm18958-201ENSMUST00000174258 762 ntBASIC20.95■□□□□ 0.94
Atp6v1aP50516 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Atp6v1aP50516 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Atp6v1aP50516 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Atp6v1aP50516 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Atp6v1aP50516 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Atp6v1aP50516 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Atp6v1aP50516 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Atp6v1aP50516 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Atp6v1aP50516 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Atp6v1aP50516 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Atp6v1aP50516 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Atp6v1aP50516 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Atp6v1aP50516 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Atp6v1aP50516 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
Atp6v1aP50516 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Atp6v1aP50516 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Atp6v1aP50516 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Atp6v1aP50516 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Atp6v1aP50516 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Atp6v1aP50516 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Atp6v1aP50516 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Atp6v1aP50516 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Atp6v1aP50516 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Atp6v1aP50516 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Atp6v1aP50516 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC20.93■□□□□ 0.94
Atp6v1aP50516 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Atp6v1aP50516 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC20.93■□□□□ 0.94
Atp6v1aP50516 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Atp6v1aP50516 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Atp6v1aP50516 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Atp6v1aP50516 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Atp6v1aP50516 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Atp6v1aP50516 Golph3-205ENSMUST00000228671 2842 ntBASIC20.92■□□□□ 0.94
Atp6v1aP50516 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Atp6v1aP50516 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
Atp6v1aP50516 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
Atp6v1aP50516 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Atp6v1aP50516 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Atp6v1aP50516 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Atp6v1aP50516 Gm11860-201ENSMUST00000122346 1010 ntBASIC20.92■□□□□ 0.94
Atp6v1aP50516 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC20.92■□□□□ 0.94
Atp6v1aP50516 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Atp6v1aP50516 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Atp6v1aP50516 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Atp6v1aP50516 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Atp6v1aP50516 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Atp6v1aP50516 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Atp6v1aP50516 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Atp6v1aP50516 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Atp6v1aP50516 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC20.92■□□□□ 0.94
Atp6v1aP50516 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Atp6v1aP50516 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Atp6v1aP50516 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Atp6v1aP50516 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Atp6v1aP50516 Mir770-201ENSMUST00000103252 94 ntBASIC20.91■□□□□ 0.94
Atp6v1aP50516 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Atp6v1aP50516 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Atp6v1aP50516 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Atp6v1aP50516 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Atp6v1aP50516 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Atp6v1aP50516 Gm27742-201ENSMUST00000184667 60 ntBASIC20.91■□□□□ 0.94
Atp6v1aP50516 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Atp6v1aP50516 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms