Protein–RNA interactions for Protein: P50284

Ltbr, Tumor necrosis factor receptor superfamily member 3, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LtbrP50284 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
LtbrP50284 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
LtbrP50284 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC20.52■□□□□ 0.88
LtbrP50284 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
LtbrP50284 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
LtbrP50284 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LtbrP50284 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
LtbrP50284 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC20.52■□□□□ 0.88
LtbrP50284 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LtbrP50284 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC20.52■□□□□ 0.88
LtbrP50284 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
LtbrP50284 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
LtbrP50284 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
LtbrP50284 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LtbrP50284 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
LtbrP50284 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
LtbrP50284 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LtbrP50284 AW822252-206ENSMUST00000208904 237 ntBASIC20.51■□□□□ 0.87
LtbrP50284 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LtbrP50284 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC20.51■□□□□ 0.87
LtbrP50284 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LtbrP50284 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LtbrP50284 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
LtbrP50284 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LtbrP50284 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LtbrP50284 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LtbrP50284 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LtbrP50284 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
LtbrP50284 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LtbrP50284 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
LtbrP50284 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
LtbrP50284 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
LtbrP50284 Gm27357-201ENSMUST00000183754 135 ntBASIC20.5■□□□□ 0.87
LtbrP50284 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC20.5■□□□□ 0.87
LtbrP50284 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
LtbrP50284 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LtbrP50284 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LtbrP50284 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
LtbrP50284 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
LtbrP50284 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
LtbrP50284 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LtbrP50284 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
LtbrP50284 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LtbrP50284 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
LtbrP50284 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC20.49■□□□□ 0.87
LtbrP50284 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC20.49■□□□□ 0.87
LtbrP50284 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LtbrP50284 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
LtbrP50284 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC20.49■□□□□ 0.87
LtbrP50284 Gm7370-201ENSMUST00000219471 767 ntBASIC20.49■□□□□ 0.87
LtbrP50284 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LtbrP50284 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
LtbrP50284 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC20.49■□□□□ 0.87
LtbrP50284 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC20.49■□□□□ 0.87
LtbrP50284 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LtbrP50284 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
LtbrP50284 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC20.49■□□□□ 0.87
LtbrP50284 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LtbrP50284 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LtbrP50284 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
LtbrP50284 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
LtbrP50284 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC20.48■□□□□ 0.87
LtbrP50284 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
LtbrP50284 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
LtbrP50284 Mir1668-201ENSMUST00000184114 107 ntBASIC20.48■□□□□ 0.87
LtbrP50284 AC164629.2-201ENSMUST00000217916 270 ntBASIC20.48■□□□□ 0.87
LtbrP50284 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC20.48■□□□□ 0.87
LtbrP50284 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
LtbrP50284 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LtbrP50284 Spr-ps1-201ENSMUST00000089584 605 ntBASIC20.48■□□□□ 0.87
LtbrP50284 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
LtbrP50284 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LtbrP50284 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LtbrP50284 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
LtbrP50284 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LtbrP50284 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
LtbrP50284 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
LtbrP50284 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
LtbrP50284 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
LtbrP50284 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LtbrP50284 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC20.47■□□□□ 0.87
LtbrP50284 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
LtbrP50284 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
LtbrP50284 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LtbrP50284 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
LtbrP50284 Otx2os1-206ENSMUST00000228153 787 ntBASIC20.47■□□□□ 0.87
LtbrP50284 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LtbrP50284 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
LtbrP50284 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
LtbrP50284 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LtbrP50284 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC20.46■□□□□ 0.87
LtbrP50284 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC20.46■□□□□ 0.87
LtbrP50284 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
LtbrP50284 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
LtbrP50284 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC20.46■□□□□ 0.87
LtbrP50284 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LtbrP50284 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
LtbrP50284 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LtbrP50284 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC20.45■□□□□ 0.86
LtbrP50284 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms