Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Nkx2-1P50220 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Nkx2-1P50220 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nkx2-1P50220 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nkx2-1P50220 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Nkx2-1P50220 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nkx2-1P50220 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Nkx2-1P50220 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Nkx2-1P50220 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Nkx2-1P50220 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Nkx2-1P50220 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC14.52□□□□□ -0.08
Nkx2-1P50220 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC14.52□□□□□ -0.08
Nkx2-1P50220 Gm37563-201ENSMUST00000192580 1513 ntBASIC14.52□□□□□ -0.08
Nkx2-1P50220 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Nkx2-1P50220 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC14.52□□□□□ -0.08
Nkx2-1P50220 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Nkx2-1P50220 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Nkx2-1P50220 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.08
Nkx2-1P50220 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Nkx2-1P50220 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Nkx2-1P50220 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Nkx2-1P50220 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.08
Nkx2-1P50220 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC14.52□□□□□ -0.09
Nkx2-1P50220 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Nkx2-1P50220 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nkx2-1P50220 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nkx2-1P50220 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Nkx2-1P50220 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nkx2-1P50220 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Nkx2-1P50220 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nkx2-1P50220 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nkx2-1P50220 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nkx2-1P50220 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Nkx2-1P50220 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nkx2-1P50220 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nkx2-1P50220 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nkx2-1P50220 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nkx2-1P50220 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nkx2-1P50220 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC14.51□□□□□ -0.09
Nkx2-1P50220 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nkx2-1P50220 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nkx2-1P50220 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nkx2-1P50220 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nkx2-1P50220 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Nkx2-1P50220 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nkx2-1P50220 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nkx2-1P50220 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC14.51□□□□□ -0.09
Nkx2-1P50220 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Nkx2-1P50220 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC14.51□□□□□ -0.09
Nkx2-1P50220 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nkx2-1P50220 Gm45774-201ENSMUST00000211992 2665 ntBASIC14.51□□□□□ -0.09
Nkx2-1P50220 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nkx2-1P50220 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC14.51□□□□□ -0.09
Nkx2-1P50220 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nkx2-1P50220 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC14.51□□□□□ -0.09
Nkx2-1P50220 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nkx2-1P50220 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nkx2-1P50220 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nkx2-1P50220 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nkx2-1P50220 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nkx2-1P50220 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC14.5□□□□□ -0.09
Nkx2-1P50220 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nkx2-1P50220 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nkx2-1P50220 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nkx2-1P50220 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nkx2-1P50220 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nkx2-1P50220 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Nkx2-1P50220 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC14.5□□□□□ -0.09
Nkx2-1P50220 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nkx2-1P50220 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nkx2-1P50220 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nkx2-1P50220 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nkx2-1P50220 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nkx2-1P50220 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nkx2-1P50220 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Nkx2-1P50220 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC14.5□□□□□ -0.09
Nkx2-1P50220 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nkx2-1P50220 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nkx2-1P50220 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nkx2-1P50220 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Nkx2-1P50220 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC14.49□□□□□ -0.09
Nkx2-1P50220 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nkx2-1P50220 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Nkx2-1P50220 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nkx2-1P50220 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC14.49□□□□□ -0.09
Nkx2-1P50220 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
Nkx2-1P50220 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nkx2-1P50220 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
Nkx2-1P50220 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Nkx2-1P50220 Gm22325-201ENSMUST00000158904 308 ntBASIC14.49□□□□□ -0.09
Nkx2-1P50220 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
Nkx2-1P50220 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC14.49□□□□□ -0.09
Nkx2-1P50220 CT010467.1-202ENSMUST00000205406 714 ntBASIC14.49□□□□□ -0.09
Nkx2-1P50220 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Nkx2-1P50220 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nkx2-1P50220 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nkx2-1P50220 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nkx2-1P50220 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nkx2-1P50220 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nkx2-1P50220 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms