Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rfx3P48381 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Rfx3P48381 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Rfx3P48381 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rfx3P48381 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rfx3P48381 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rfx3P48381 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Rfx3P48381 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Rfx3P48381 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rfx3P48381 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rfx3P48381 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rfx3P48381 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
Rfx3P48381 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rfx3P48381 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rfx3P48381 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC15.81■□□□□ 0.12
Rfx3P48381 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Rfx3P48381 AC140264.2-202ENSMUST00000218746 817 ntBASIC15.81■□□□□ 0.12
Rfx3P48381 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rfx3P48381 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Rfx3P48381 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rfx3P48381 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
Rfx3P48381 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rfx3P48381 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rfx3P48381 Gm37194-201ENSMUST00000193092 3031 ntBASIC15.81■□□□□ 0.12
Rfx3P48381 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Rfx3P48381 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rfx3P48381 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Rfx3P48381 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Rfx3P48381 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rfx3P48381 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC15.8■□□□□ 0.12
Rfx3P48381 Gm37179-201ENSMUST00000194862 823 ntBASIC15.8■□□□□ 0.12
Rfx3P48381 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Rfx3P48381 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rfx3P48381 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC15.8■□□□□ 0.12
Rfx3P48381 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rfx3P48381 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Rfx3P48381 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rfx3P48381 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Rfx3P48381 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rfx3P48381 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rfx3P48381 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
Rfx3P48381 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Rfx3P48381 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Rfx3P48381 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Rfx3P48381 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rfx3P48381 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rfx3P48381 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC15.79■□□□□ 0.12
Rfx3P48381 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rfx3P48381 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rfx3P48381 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC15.79■□□□□ 0.12
Rfx3P48381 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Rfx3P48381 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC15.79■□□□□ 0.12
Rfx3P48381 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Rfx3P48381 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rfx3P48381 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC15.79■□□□□ 0.12
Rfx3P48381 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rfx3P48381 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rfx3P48381 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Rfx3P48381 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rfx3P48381 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rfx3P48381 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rfx3P48381 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rfx3P48381 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
Rfx3P48381 Gm12933-201ENSMUST00000120203 872 ntBASIC15.78■□□□□ 0.12
Rfx3P48381 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Rfx3P48381 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC15.78■□□□□ 0.12
Rfx3P48381 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC15.78■□□□□ 0.12
Rfx3P48381 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC15.78■□□□□ 0.12
Rfx3P48381 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rfx3P48381 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rfx3P48381 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rfx3P48381 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC15.78■□□□□ 0.12
Rfx3P48381 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rfx3P48381 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rfx3P48381 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rfx3P48381 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rfx3P48381 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC15.78■□□□□ 0.12
Rfx3P48381 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rfx3P48381 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
Rfx3P48381 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rfx3P48381 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Rfx3P48381 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Rfx3P48381 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rfx3P48381 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Rfx3P48381 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rfx3P48381 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rfx3P48381 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Rfx3P48381 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rfx3P48381 Gm2399-201ENSMUST00000104944 225 ntBASIC15.77■□□□□ 0.12
Rfx3P48381 Gm13148-201ENSMUST00000118892 745 ntBASIC15.77■□□□□ 0.12
Rfx3P48381 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC15.77■□□□□ 0.12
Rfx3P48381 Gm29257-201ENSMUST00000186115 639 ntBASIC15.77■□□□□ 0.12
Rfx3P48381 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Rfx3P48381 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rfx3P48381 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Rfx3P48381 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Rfx3P48381 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rfx3P48381 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Rfx3P48381 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Rfx3P48381 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms