Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tnfsf4P43488 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Tnfsf4P43488 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Tnfsf4P43488 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Tnfsf4P43488 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tnfsf4P43488 Gm7292-201ENSMUST00000194706 2527 ntBASIC16.9■□□□□ 0.3
Tnfsf4P43488 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Tnfsf4P43488 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.3
Tnfsf4P43488 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Tnfsf4P43488 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tnfsf4P43488 Flg-201ENSMUST00000050758 1488 ntBASIC16.89■□□□□ 0.29
Tnfsf4P43488 Gm10418-201ENSMUST00000100943 576 ntBASIC16.89■□□□□ 0.29
Tnfsf4P43488 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tnfsf4P43488 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC16.89■□□□□ 0.29
Tnfsf4P43488 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Tnfsf4P43488 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tnfsf4P43488 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tnfsf4P43488 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC16.89■□□□□ 0.29
Tnfsf4P43488 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Tnfsf4P43488 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tnfsf4P43488 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tnfsf4P43488 Gm37820-201ENSMUST00000194021 2147 ntBASIC16.88■□□□□ 0.29
Tnfsf4P43488 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC16.88■□□□□ 0.29
Tnfsf4P43488 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Tnfsf4P43488 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Tnfsf4P43488 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Tnfsf4P43488 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Tnfsf4P43488 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC16.88■□□□□ 0.29
Tnfsf4P43488 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Tnfsf4P43488 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
Tnfsf4P43488 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Tnfsf4P43488 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC16.88■□□□□ 0.29
Tnfsf4P43488 Gm42569-201ENSMUST00000200539 472 ntBASIC16.88■□□□□ 0.29
Tnfsf4P43488 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC16.88■□□□□ 0.29
Tnfsf4P43488 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC16.88■□□□□ 0.29
Tnfsf4P43488 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Tnfsf4P43488 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Tnfsf4P43488 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Tnfsf4P43488 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Tnfsf4P43488 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC16.88■□□□□ 0.29
Tnfsf4P43488 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Tnfsf4P43488 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
Tnfsf4P43488 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Tnfsf4P43488 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Tnfsf4P43488 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Tnfsf4P43488 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Tnfsf4P43488 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Tnfsf4P43488 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Tnfsf4P43488 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Tnfsf4P43488 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Tnfsf4P43488 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Tnfsf4P43488 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Tnfsf4P43488 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC16.87■□□□□ 0.29
Tnfsf4P43488 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Tnfsf4P43488 AC125311.2-201ENSMUST00000227477 1940 ntBASIC16.87■□□□□ 0.29
Tnfsf4P43488 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Tnfsf4P43488 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Tnfsf4P43488 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Tnfsf4P43488 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Tnfsf4P43488 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Tnfsf4P43488 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Tnfsf4P43488 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Tnfsf4P43488 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Tnfsf4P43488 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Tnfsf4P43488 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Tnfsf4P43488 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Tnfsf4P43488 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Tnfsf4P43488 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Tnfsf4P43488 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Tnfsf4P43488 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
Tnfsf4P43488 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Tnfsf4P43488 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC16.86■□□□□ 0.29
Tnfsf4P43488 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Tnfsf4P43488 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Tnfsf4P43488 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Tnfsf4P43488 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Tnfsf4P43488 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Tnfsf4P43488 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Tnfsf4P43488 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Tnfsf4P43488 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Tnfsf4P43488 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Tnfsf4P43488 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Tnfsf4P43488 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Tnfsf4P43488 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Tnfsf4P43488 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Tnfsf4P43488 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Tnfsf4P43488 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Tnfsf4P43488 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Tnfsf4P43488 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC16.85■□□□□ 0.29
Tnfsf4P43488 Gm26524-201ENSMUST00000192339 390 ntBASIC16.85■□□□□ 0.29
Tnfsf4P43488 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC16.85■□□□□ 0.29
Tnfsf4P43488 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC16.85■□□□□ 0.29
Tnfsf4P43488 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC16.85■□□□□ 0.29
Tnfsf4P43488 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Tnfsf4P43488 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Tnfsf4P43488 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC16.85■□□□□ 0.29
Tnfsf4P43488 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Tnfsf4P43488 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Tnfsf4P43488 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC16.84■□□□□ 0.29
Tnfsf4P43488 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms