Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Cdx2P43241 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cdx2P43241 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cdx2P43241 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC16.6■□□□□ 0.25
Cdx2P43241 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Cdx2P43241 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cdx2P43241 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cdx2P43241 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC16.6■□□□□ 0.25
Cdx2P43241 Otx2os1-206ENSMUST00000228153 787 ntBASIC16.6■□□□□ 0.25
Cdx2P43241 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cdx2P43241 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cdx2P43241 Gm10616-201ENSMUST00000205285 2127 ntBASIC16.6■□□□□ 0.25
Cdx2P43241 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
Cdx2P43241 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Cdx2P43241 Gm38342-201ENSMUST00000195710 2980 ntBASIC16.59■□□□□ 0.25
Cdx2P43241 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Cdx2P43241 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cdx2P43241 Gm37374-201ENSMUST00000194954 1829 ntBASIC16.59■□□□□ 0.25
Cdx2P43241 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Cdx2P43241 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cdx2P43241 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Cdx2P43241 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cdx2P43241 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cdx2P43241 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
Cdx2P43241 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cdx2P43241 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Cdx2P43241 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Cdx2P43241 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Cdx2P43241 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC16.58■□□□□ 0.25
Cdx2P43241 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.25
Cdx2P43241 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Cdx2P43241 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Cdx2P43241 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cdx2P43241 Mir770-201ENSMUST00000103252 94 ntBASIC16.58■□□□□ 0.24
Cdx2P43241 Gm11860-201ENSMUST00000122346 1010 ntBASIC16.58■□□□□ 0.24
Cdx2P43241 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC16.58■□□□□ 0.24
Cdx2P43241 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC16.58■□□□□ 0.24
Cdx2P43241 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cdx2P43241 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC16.58■□□□□ 0.24
Cdx2P43241 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Cdx2P43241 Gm27742-201ENSMUST00000184667 60 ntBASIC16.58■□□□□ 0.24
Cdx2P43241 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC16.58■□□□□ 0.24
Cdx2P43241 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Cdx2P43241 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cdx2P43241 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.24
Cdx2P43241 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cdx2P43241 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Cdx2P43241 Actl10-202ENSMUST00000226583 1501 ntBASIC16.58■□□□□ 0.24
Cdx2P43241 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cdx2P43241 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Cdx2P43241 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
Cdx2P43241 Gm43213-201ENSMUST00000151866 1790 ntBASIC16.57■□□□□ 0.24
Cdx2P43241 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cdx2P43241 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cdx2P43241 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cdx2P43241 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Cdx2P43241 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Cdx2P43241 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC16.57■□□□□ 0.24
Cdx2P43241 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Cdx2P43241 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Cdx2P43241 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cdx2P43241 Gm37722-201ENSMUST00000193757 208 ntBASIC16.57■□□□□ 0.24
Cdx2P43241 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cdx2P43241 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Cdx2P43241 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cdx2P43241 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Cdx2P43241 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cdx2P43241 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cdx2P43241 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cdx2P43241 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cdx2P43241 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cdx2P43241 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC16.56■□□□□ 0.24
Cdx2P43241 Gm27357-201ENSMUST00000183754 135 ntBASIC16.56■□□□□ 0.24
Cdx2P43241 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC16.56■□□□□ 0.24
Cdx2P43241 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC16.56■□□□□ 0.24
Cdx2P43241 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cdx2P43241 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Cdx2P43241 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Cdx2P43241 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Cdx2P43241 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
Cdx2P43241 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cdx2P43241 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cdx2P43241 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cdx2P43241 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cdx2P43241 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cdx2P43241 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cdx2P43241 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cdx2P43241 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cdx2P43241 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cdx2P43241 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cdx2P43241 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cdx2P43241 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cdx2P43241 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Cdx2P43241 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Cdx2P43241 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
Cdx2P43241 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cdx2P43241 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cdx2P43241 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cdx2P43241 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cdx2P43241 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms