Protein–RNA interactions for Protein: P38060

Hmgcl, Hydroxymethylglutaryl-CoA lyase, mitochondrial, mousemouse

Predictions only

Length 325 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HmgclP38060 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HmgclP38060 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC17.21■□□□□ 0.35
HmgclP38060 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HmgclP38060 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HmgclP38060 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HmgclP38060 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HmgclP38060 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.21■□□□□ 0.35
HmgclP38060 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
HmgclP38060 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
HmgclP38060 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
HmgclP38060 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
HmgclP38060 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HmgclP38060 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HmgclP38060 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
HmgclP38060 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HmgclP38060 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HmgclP38060 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HmgclP38060 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
HmgclP38060 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HmgclP38060 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HmgclP38060 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
HmgclP38060 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC17.21■□□□□ 0.34
HmgclP38060 Gm19721-201ENSMUST00000195284 1764 ntBASIC17.2■□□□□ 0.34
HmgclP38060 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HmgclP38060 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HmgclP38060 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
HmgclP38060 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC17.2■□□□□ 0.34
HmgclP38060 Gm22240-201ENSMUST00000175225 82 ntBASIC17.2■□□□□ 0.34
HmgclP38060 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
HmgclP38060 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HmgclP38060 AC154649.1-201ENSMUST00000227392 384 ntBASIC17.2■□□□□ 0.34
HmgclP38060 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HmgclP38060 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
HmgclP38060 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC17.2■□□□□ 0.34
HmgclP38060 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
HmgclP38060 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.2■□□□□ 0.34
HmgclP38060 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC17.19■□□□□ 0.34
HmgclP38060 Gm42900-201ENSMUST00000197184 2167 ntBASIC17.19■□□□□ 0.34
HmgclP38060 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
HmgclP38060 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HmgclP38060 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HmgclP38060 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HmgclP38060 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HmgclP38060 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HmgclP38060 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HmgclP38060 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HmgclP38060 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HmgclP38060 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HmgclP38060 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
HmgclP38060 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HmgclP38060 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HmgclP38060 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
HmgclP38060 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
HmgclP38060 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HmgclP38060 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
HmgclP38060 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC17.18■□□□□ 0.34
HmgclP38060 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HmgclP38060 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HmgclP38060 AC153881.1-201ENSMUST00000214448 284 ntBASIC17.18■□□□□ 0.34
HmgclP38060 AC175538.1-201ENSMUST00000225343 1269 ntBASIC17.18■□□□□ 0.34
HmgclP38060 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
HmgclP38060 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HmgclP38060 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HmgclP38060 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC17.18■□□□□ 0.34
HmgclP38060 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.18■□□□□ 0.34
HmgclP38060 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC17.18■□□□□ 0.34
HmgclP38060 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HmgclP38060 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
HmgclP38060 Gm37519-201ENSMUST00000191687 2210 ntBASIC17.17■□□□□ 0.34
HmgclP38060 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
HmgclP38060 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
HmgclP38060 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
HmgclP38060 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HmgclP38060 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
HmgclP38060 Gm9694-201ENSMUST00000193347 1189 ntBASIC17.17■□□□□ 0.34
HmgclP38060 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC17.17■□□□□ 0.34
HmgclP38060 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HmgclP38060 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
HmgclP38060 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
HmgclP38060 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HmgclP38060 Gm43808-201ENSMUST00000202534 2065 ntBASIC17.17■□□□□ 0.34
HmgclP38060 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HmgclP38060 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
HmgclP38060 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HmgclP38060 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HmgclP38060 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HmgclP38060 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
HmgclP38060 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HmgclP38060 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HmgclP38060 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.16■□□□□ 0.34
HmgclP38060 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HmgclP38060 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HmgclP38060 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HmgclP38060 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HmgclP38060 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HmgclP38060 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HmgclP38060 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
HmgclP38060 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HmgclP38060 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
HmgclP38060 Gm24841-201ENSMUST00000158676 357 ntBASIC17.16■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms