Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Foxa1P35582 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Foxa1P35582 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Foxa1P35582 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Foxa1P35582 Gm10517-202ENSMUST00000192970 758 ntBASIC16.17■□□□□ 0.18
Foxa1P35582 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Foxa1P35582 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Foxa1P35582 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Foxa1P35582 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Foxa1P35582 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Foxa1P35582 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Foxa1P35582 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Foxa1P35582 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Foxa1P35582 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Foxa1P35582 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Foxa1P35582 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Foxa1P35582 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Foxa1P35582 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC16.16■□□□□ 0.18
Foxa1P35582 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Foxa1P35582 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC16.16■□□□□ 0.18
Foxa1P35582 Mir1199-201ENSMUST00000117015 119 ntBASIC16.16■□□□□ 0.18
Foxa1P35582 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Foxa1P35582 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Foxa1P35582 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Foxa1P35582 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC16.16■□□□□ 0.18
Foxa1P35582 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Foxa1P35582 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Foxa1P35582 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC16.16■□□□□ 0.18
Foxa1P35582 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Foxa1P35582 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Foxa1P35582 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Foxa1P35582 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Foxa1P35582 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Foxa1P35582 Gm45606-201ENSMUST00000209836 2795 ntBASIC16.15■□□□□ 0.18
Foxa1P35582 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC16.15■□□□□ 0.18
Foxa1P35582 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Foxa1P35582 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Foxa1P35582 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Foxa1P35582 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Foxa1P35582 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Foxa1P35582 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Foxa1P35582 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC16.15■□□□□ 0.18
Foxa1P35582 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Foxa1P35582 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Foxa1P35582 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Foxa1P35582 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC16.15■□□□□ 0.18
Foxa1P35582 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC16.15■□□□□ 0.18
Foxa1P35582 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Foxa1P35582 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Foxa1P35582 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Foxa1P35582 Gm37811-201ENSMUST00000192416 2601 ntBASIC16.15■□□□□ 0.18
Foxa1P35582 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Foxa1P35582 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.18
Foxa1P35582 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Foxa1P35582 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Foxa1P35582 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Foxa1P35582 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
Foxa1P35582 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Foxa1P35582 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Foxa1P35582 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC16.14■□□□□ 0.17
Foxa1P35582 Gm8969-201ENSMUST00000199694 526 ntBASIC16.14■□□□□ 0.17
Foxa1P35582 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC16.14■□□□□ 0.17
Foxa1P35582 Gm4974-201ENSMUST00000209974 875 ntBASIC16.14■□□□□ 0.17
Foxa1P35582 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Foxa1P35582 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Foxa1P35582 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Foxa1P35582 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Foxa1P35582 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Foxa1P35582 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Foxa1P35582 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Foxa1P35582 Gm43272-201ENSMUST00000200599 1584 ntBASIC16.13■□□□□ 0.17
Foxa1P35582 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Foxa1P35582 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Foxa1P35582 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Foxa1P35582 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Foxa1P35582 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Foxa1P35582 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC16.13■□□□□ 0.17
Foxa1P35582 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC16.13■□□□□ 0.17
Foxa1P35582 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Foxa1P35582 AC175538.1-201ENSMUST00000225343 1269 ntBASIC16.13■□□□□ 0.17
Foxa1P35582 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Foxa1P35582 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Foxa1P35582 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Foxa1P35582 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Foxa1P35582 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Foxa1P35582 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Foxa1P35582 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Foxa1P35582 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC16.12■□□□□ 0.17
Foxa1P35582 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Foxa1P35582 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Foxa1P35582 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Foxa1P35582 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
Foxa1P35582 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Foxa1P35582 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Foxa1P35582 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Foxa1P35582 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Foxa1P35582 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC16.12■□□□□ 0.17
Foxa1P35582 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Foxa1P35582 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Foxa1P35582 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC16.12■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms