Protein–RNA interactions for Protein: P31650

Slc6a11, Sodium- and chloride-dependent GABA transporter 3, mousemouse

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a11P31650 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Slc6a11P31650 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Slc6a11P31650 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Slc6a11P31650 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Slc6a11P31650 Gm10461-201ENSMUST00000202073 4786 ntBASIC16.6■□□□□ 0.25
Slc6a11P31650 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Slc6a11P31650 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC16.6■□□□□ 0.25
Slc6a11P31650 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Slc6a11P31650 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Slc6a11P31650 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
Slc6a11P31650 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC16.6■□□□□ 0.25
Slc6a11P31650 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Slc6a11P31650 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Slc6a11P31650 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Slc6a11P31650 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Slc6a11P31650 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Slc6a11P31650 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Slc6a11P31650 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Slc6a11P31650 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Slc6a11P31650 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Slc6a11P31650 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Slc6a11P31650 Gm45244-201ENSMUST00000211328 2200 ntBASIC16.6■□□□□ 0.25
Slc6a11P31650 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Slc6a11P31650 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Slc6a11P31650 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Slc6a11P31650 Gm44544-201ENSMUST00000207052 1844 ntBASIC16.59■□□□□ 0.25
Slc6a11P31650 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Slc6a11P31650 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Slc6a11P31650 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
Slc6a11P31650 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
Slc6a11P31650 Gm6576-201ENSMUST00000169678 883 ntBASIC16.59■□□□□ 0.25
Slc6a11P31650 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
Slc6a11P31650 Arhgef33-211ENSMUST00000225658 473 ntBASIC16.59■□□□□ 0.25
Slc6a11P31650 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Slc6a11P31650 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC16.59■□□□□ 0.25
Slc6a11P31650 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Slc6a11P31650 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC16.59■□□□□ 0.25
Slc6a11P31650 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Slc6a11P31650 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Slc6a11P31650 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Slc6a11P31650 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Slc6a11P31650 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Slc6a11P31650 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
Slc6a11P31650 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Slc6a11P31650 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Slc6a11P31650 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Slc6a11P31650 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC16.58■□□□□ 0.24
Slc6a11P31650 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Slc6a11P31650 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Slc6a11P31650 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Slc6a11P31650 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Slc6a11P31650 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Slc6a11P31650 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Slc6a11P31650 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Slc6a11P31650 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC16.58■□□□□ 0.24
Slc6a11P31650 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Slc6a11P31650 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Slc6a11P31650 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Slc6a11P31650 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Slc6a11P31650 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Slc6a11P31650 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC16.57■□□□□ 0.24
Slc6a11P31650 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Slc6a11P31650 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Slc6a11P31650 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Slc6a11P31650 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Slc6a11P31650 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Slc6a11P31650 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC16.57■□□□□ 0.24
Slc6a11P31650 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC16.57■□□□□ 0.24
Slc6a11P31650 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC16.57■□□□□ 0.24
Slc6a11P31650 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Slc6a11P31650 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Slc6a11P31650 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Slc6a11P31650 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC16.57■□□□□ 0.24
Slc6a11P31650 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Slc6a11P31650 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Slc6a11P31650 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Slc6a11P31650 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC16.56■□□□□ 0.24
Slc6a11P31650 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Slc6a11P31650 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Slc6a11P31650 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
Slc6a11P31650 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
Slc6a11P31650 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Slc6a11P31650 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Slc6a11P31650 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC16.56■□□□□ 0.24
Slc6a11P31650 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC16.56■□□□□ 0.24
Slc6a11P31650 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Slc6a11P31650 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC16.56■□□□□ 0.24
Slc6a11P31650 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Slc6a11P31650 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Slc6a11P31650 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Slc6a11P31650 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC16.55■□□□□ 0.24
Slc6a11P31650 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Slc6a11P31650 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Slc6a11P31650 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Slc6a11P31650 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Slc6a11P31650 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Slc6a11P31650 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Slc6a11P31650 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC16.55■□□□□ 0.24
Slc6a11P31650 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Slc6a11P31650 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms