Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Vcam1P29533 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Vcam1P29533 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC20.16■□□□□ 0.82
Vcam1P29533 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
Vcam1P29533 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Vcam1P29533 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Vcam1P29533 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Vcam1P29533 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Vcam1P29533 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Vcam1P29533 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Vcam1P29533 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Vcam1P29533 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Vcam1P29533 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Vcam1P29533 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Vcam1P29533 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
Vcam1P29533 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Vcam1P29533 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
Vcam1P29533 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC20.15■□□□□ 0.82
Vcam1P29533 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Vcam1P29533 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Vcam1P29533 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Vcam1P29533 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Vcam1P29533 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Vcam1P29533 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Vcam1P29533 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC20.15■□□□□ 0.82
Vcam1P29533 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Vcam1P29533 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Vcam1P29533 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC20.14■□□□□ 0.82
Vcam1P29533 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Vcam1P29533 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Vcam1P29533 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Vcam1P29533 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Vcam1P29533 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Vcam1P29533 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Vcam1P29533 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC20.14■□□□□ 0.81
Vcam1P29533 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC20.14■□□□□ 0.81
Vcam1P29533 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Vcam1P29533 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Vcam1P29533 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Vcam1P29533 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Vcam1P29533 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Vcam1P29533 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Vcam1P29533 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC20.13■□□□□ 0.81
Vcam1P29533 Gm9013-201ENSMUST00000132939 882 ntBASIC20.13■□□□□ 0.81
Vcam1P29533 Ank2-226ENSMUST00000189368 339 ntBASIC20.13■□□□□ 0.81
Vcam1P29533 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC20.13■□□□□ 0.81
Vcam1P29533 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Vcam1P29533 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Vcam1P29533 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Vcam1P29533 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Vcam1P29533 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Vcam1P29533 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Vcam1P29533 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Vcam1P29533 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
Vcam1P29533 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Vcam1P29533 Actl10-202ENSMUST00000226583 1501 ntBASIC20.12■□□□□ 0.81
Vcam1P29533 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
Vcam1P29533 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC20.12■□□□□ 0.81
Vcam1P29533 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Vcam1P29533 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Vcam1P29533 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Vcam1P29533 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC20.12■□□□□ 0.81
Vcam1P29533 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Vcam1P29533 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC20.12■□□□□ 0.81
Vcam1P29533 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC20.12■□□□□ 0.81
Vcam1P29533 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Vcam1P29533 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Vcam1P29533 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Vcam1P29533 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC20.12■□□□□ 0.81
Vcam1P29533 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC20.12■□□□□ 0.81
Vcam1P29533 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Vcam1P29533 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Vcam1P29533 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Vcam1P29533 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Vcam1P29533 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Vcam1P29533 Gm7284-201ENSMUST00000131667 944 ntBASIC20.11■□□□□ 0.81
Vcam1P29533 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Vcam1P29533 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Vcam1P29533 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Vcam1P29533 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Vcam1P29533 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Vcam1P29533 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Vcam1P29533 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Vcam1P29533 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Vcam1P29533 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Vcam1P29533 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Vcam1P29533 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC20.1■□□□□ 0.81
Vcam1P29533 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Vcam1P29533 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Vcam1P29533 Gm26039-201ENSMUST00000158152 144 ntBASIC20.1■□□□□ 0.81
Vcam1P29533 Gm29518-201ENSMUST00000190858 372 ntBASIC20.1■□□□□ 0.81
Vcam1P29533 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Vcam1P29533 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Vcam1P29533 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Vcam1P29533 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Vcam1P29533 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Vcam1P29533 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Vcam1P29533 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Vcam1P29533 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Vcam1P29533 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms