Protein–RNA interactions for Protein: P27664

Pde6a, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6aP27664 Arhgef4-208ENSMUST00000211073 171 ntBASIC20.27■□□□□ 0.84
Pde6aP27664 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pde6aP27664 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pde6aP27664 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pde6aP27664 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pde6aP27664 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Pde6aP27664 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC20.27■□□□□ 0.84
Pde6aP27664 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Pde6aP27664 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Pde6aP27664 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
Pde6aP27664 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC20.26■□□□□ 0.83
Pde6aP27664 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Pde6aP27664 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pde6aP27664 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC20.26■□□□□ 0.83
Pde6aP27664 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pde6aP27664 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pde6aP27664 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Pde6aP27664 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pde6aP27664 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Pde6aP27664 Gm3375-201ENSMUST00000203929 796 ntBASIC20.26■□□□□ 0.83
Pde6aP27664 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC20.26■□□□□ 0.83
Pde6aP27664 Odf3b-204ENSMUST00000227834 930 ntBASIC20.26■□□□□ 0.83
Pde6aP27664 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pde6aP27664 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pde6aP27664 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pde6aP27664 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Pde6aP27664 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pde6aP27664 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Pde6aP27664 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pde6aP27664 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pde6aP27664 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pde6aP27664 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pde6aP27664 Gm43702-201ENSMUST00000198772 2546 ntBASIC20.25■□□□□ 0.83
Pde6aP27664 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC20.25■□□□□ 0.83
Pde6aP27664 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pde6aP27664 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pde6aP27664 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pde6aP27664 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pde6aP27664 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Pde6aP27664 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Pde6aP27664 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Pde6aP27664 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pde6aP27664 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pde6aP27664 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pde6aP27664 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Pde6aP27664 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC20.25■□□□□ 0.83
Pde6aP27664 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
Pde6aP27664 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Pde6aP27664 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Pde6aP27664 Gm38027-201ENSMUST00000192315 235 ntBASIC20.24■□□□□ 0.83
Pde6aP27664 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC20.24■□□□□ 0.83
Pde6aP27664 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Pde6aP27664 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pde6aP27664 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC20.24■□□□□ 0.83
Pde6aP27664 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pde6aP27664 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Pde6aP27664 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pde6aP27664 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Pde6aP27664 Gm37055-201ENSMUST00000191866 133 ntBASIC20.23■□□□□ 0.83
Pde6aP27664 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Pde6aP27664 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pde6aP27664 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pde6aP27664 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
Pde6aP27664 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pde6aP27664 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pde6aP27664 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pde6aP27664 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pde6aP27664 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Pde6aP27664 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pde6aP27664 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pde6aP27664 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pde6aP27664 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC20.22■□□□□ 0.83
Pde6aP27664 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Pde6aP27664 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Pde6aP27664 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pde6aP27664 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pde6aP27664 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Pde6aP27664 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Pde6aP27664 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pde6aP27664 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pde6aP27664 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Pde6aP27664 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC20.21■□□□□ 0.83
Pde6aP27664 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.83
Pde6aP27664 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Pde6aP27664 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC20.21■□□□□ 0.83
Pde6aP27664 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC20.21■□□□□ 0.83
Pde6aP27664 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC20.21■□□□□ 0.83
Pde6aP27664 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pde6aP27664 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC20.21■□□□□ 0.83
Pde6aP27664 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pde6aP27664 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.83
Pde6aP27664 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pde6aP27664 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pde6aP27664 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC20.2■□□□□ 0.82
Pde6aP27664 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Pde6aP27664 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pde6aP27664 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
Pde6aP27664 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC20.2■□□□□ 0.82
Pde6aP27664 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC20.2■□□□□ 0.82
Pde6aP27664 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms